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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, vacuole

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
  • golgi 1
  • mitochondrion 3
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, peroxisome, plastid, vacuole
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026880.1-P Field mustard extracellular 64.45 75.98
CDY33795 Canola extracellular 64.45 75.98
CDY16114 Canola extracellular 63.98 75.42
CDY34558 Canola extracellular 60.19 73.84
CDX96880 Canola extracellular 58.77 72.09
Bra016724.1-P Field mustard extracellular 58.77 72.09
CDY16115 Canola extracellular 48.82 66.45
Bra026878.1-P Field mustard extracellular 43.6 65.25
Bra026879.1-P Field mustard extracellular 43.13 64.08
CDY36415 Canola extracellular 58.77 63.27
CDX98134 Canola extracellular 56.4 62.3
Bra019700.1-P Field mustard extracellular 57.82 61.93
AT2G03505.1 Thale cress extracellular 47.39 59.52
PGSC0003DMT400045877 Potato extracellular 24.17 47.66
KRG89485 Soybean extracellular 36.02 43.18
KRH50525 Soybean extracellular 36.97 42.62
GSMUA_Achr4P23440_001 Banana cytosol 27.01 38.0
VIT_01s0011g00570.t01 Wine grape extracellular 34.6 37.82
KRH75030 Soybean extracellular 38.39 37.67
KRH70882 Soybean extracellular 38.39 37.33
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 29.86 35.0
AT5G61130.1 Thale cress extracellular 33.18 34.83
Os03t0756300-01 Rice extracellular 28.44 34.29
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 30.81 34.03
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 30.81 33.85
GSMUA_Achr5P08900_001 Banana extracellular 30.33 33.68
TraesCS5A01G393200.1 Wheat extracellular 26.54 33.53
GSMUA_Achr9P07140_001 Banana extracellular 29.38 33.33
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 31.28 33.33
TraesCS5B01G398000.1 Wheat extracellular 25.59 32.93
GSMUA_Achr7P26650_001 Banana extracellular 18.01 32.76
AT1G18650.1 Thale cress extracellular 28.44 32.61
TraesCS5D01G403000.1 Wheat extracellular 25.59 32.53
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.81 32.5
TraesCS5B01G399400.1 Wheat extracellular 24.17 32.28
GSMUA_Achr8P28170_001 Banana extracellular 23.7 32.26
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.81 31.71
EER97492 Sorghum extracellular 28.91 31.44
HORVU4Hr1G028360.1 Barley peroxisome, plastid 18.48 30.95
AT5G08000.2 Thale cress extracellular 30.81 30.52
Os07t0600700-01 Rice extracellular 27.96 30.41
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 27.01 30.32
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 26.54 29.47
AT1G69295.1 Thale cress extracellular 30.81 29.28
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 27.49 29.15
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 27.49 29.15
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 27.01 28.93
AT5G35740.1 Thale cress extracellular 16.11 28.57
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 26.54 28.43
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 26.54 28.28
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 26.54 28.0
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 26.07 27.92
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 26.07 27.78
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 25.59 27.55
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 24.17 27.13
TraesCS3A01G302400.1 Wheat extracellular 24.64 26.53
TraesCS3D01G299600.1 Wheat extracellular 24.64 26.53
OQU87600 Sorghum extracellular 23.22 26.06
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 29.86 25.93
Os01t0763900-01 Rice extracellular 25.12 25.6
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 25.12 25.36
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 25.12 25.12
TraesCS1A01G332500.1 Wheat extracellular 24.64 24.88
Solyc04g005420.2.1 Tomato extracellular, vacuole 36.02 24.76
Zm00001d013250_P003 Maize extracellular 26.07 24.55
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 25.12 24.42
Os05t0512600-01 Rice extracellular 26.07 24.12
AT2G04910.1 Thale cress extracellular 13.74 23.39
HORVU2Hr1G033470.1 Barley cytosol, plastid 30.81 21.89
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 25.12 21.72
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 23.22 21.68
KXG37528 Sorghum mitochondrion 27.01 21.51
Zm00001d010728_P005 Maize extracellular 22.27 21.46
AT4G05430.3 Thale cress extracellular, plasma membrane 17.06 21.43
TraesCS5A01G548300.1 Wheat plasma membrane 19.91 21.43
AT4G13600.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 23.22 21.21
EES18492 Sorghum extracellular 22.75 20.96
Zm00001d038682_P001 Maize extracellular 21.8 20.0
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 25.12 19.27
HORVU5Hr1G096090.6 Barley plastid 21.33 19.23
AT2G30933.1 Thale cress extracellular 19.91 18.5
HORVU3Hr1G074010.3 Barley cytosol, plastid 25.12 18.21
AT1G29380.1 Thale cress extracellular 22.27 14.92
AT3G58100.2 Thale cress cytosol 16.59 13.67
AT1G09460.1 Thale cress extracellular, vacuole 21.33 13.64
AT5G67460.1 Thale cress vacuole 16.59 9.21
AT1G79480.1 Thale cress extracellular 16.11 8.56
Protein Annotations
MapMan:35.1EntrezGene:837944UniProt:A0A1P8AME0ProteinID:AEE29073.1EMBL:AK221673ProteinID:ANM57826.1
ArrayExpress:AT1G13830EnsemblPlantsGene:AT1G13830RefSeq:AT1G13830TAIR:AT1G13830RefSeq:AT1G13830-TAIR-GEnsemblPlants:AT1G13830.2
EMBL:AY120732EMBL:BT000354GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020GO:GO:0016787GO:GO:0030246
GO:GO:0030247GO:GO:0046658RefSeq:NP_001320308.1RefSeq:NP_172838.2ProteinID:OAP19582.1PFAM:PF07983
PANTHER:PTHR32227PANTHER:PTHR32227:SF98SMART:SM00768UniParc:UPI000848547DInterPro:X8SEG:seg
Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT1G13830]
Coordinates
chr1:-:4739693..4740842
Molecular Weight (calculated)
22125.7 Da
IEP (calculated)
6.199
GRAVY (calculated)
-0.214
Length
211 amino acids
Sequence
(BLAST)
001: MQRNDLFNLS TTNRSQCSGF MVQSKAISFY LGAIYCLCKD GIGDTELQTS IDYACGTLAD CNPIHDKGTC YQPDTIKSHC DWAVNSYFQN AAQVPGSCNF
101: SGTATTNPNP PSNLANGCIY PSSPSSTRSP PSTTPPTGTT PTNGTTPFPG TPFPGTPFPG TPPVFGPTGV FNPSNPGSGA SSLGTSSVFT LCFSLLAFLW
201: GSDVRFGFSH V
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.