Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 6
- plasma membrane 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031835.1-P | Field mustard | vacuole | 78.95 | 79.16 |
| CDY37850 | Canola | vacuole | 78.16 | 78.16 |
| CDY43577 | Canola | vacuole | 76.32 | 75.92 |
| KRH77114 | Soybean | extracellular, vacuole | 45.53 | 43.8 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 47.37 | 43.58 |
| KRH28365 | Soybean | vacuole | 45.0 | 42.96 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 41.58 | 40.0 |
| GSMUA_Achr10P... | Banana | mitochondrion, plasma membrane, vacuole | 35.0 | 37.57 |
| AT5G35740.1 | Thale cress | extracellular | 10.79 | 34.45 |
| Os10t0347000-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 29.47 | 32.56 |
| AT2G04910.1 | Thale cress | extracellular | 10.26 | 31.45 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 13.68 | 30.95 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 26.58 | 27.37 |
| AT2G30933.1 | Thale cress | extracellular | 14.74 | 24.67 |
| AT1G18650.1 | Thale cress | extracellular | 11.84 | 24.46 |
| AT5G08000.2 | Thale cress | extracellular | 12.11 | 21.6 |
| AT5G61130.1 | Thale cress | extracellular | 11.32 | 21.39 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 11.05 | 21.32 |
| AT1G79480.1 | Thale cress | extracellular | 21.84 | 20.91 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 12.37 | 20.35 |
| AT2G03505.1 | Thale cress | extracellular | 8.95 | 20.24 |
| AT1G29380.1 | Thale cress | extracellular | 16.05 | 19.37 |
| AT1G69295.1 | Thale cress | extracellular | 10.79 | 18.47 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 14.47 | 16.67 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 9.21 | 16.59 |
| AT3G58100.2 | Thale cress | cytosol | 10.26 | 15.23 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:836882 | ProteinID:AED98347.1 | ArrayExpress:AT5G67460 |
| EnsemblPlantsGene:AT5G67460 | RefSeq:AT5G67460 | TAIR:AT5G67460 | RefSeq:AT5G67460-TAIR-G | EnsemblPlants:AT5G67460.1 | TAIR:AT5G67460.1 |
| ProteinID:BAB08454.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | RefSeq:NP_201547.1 |
| PFAM:PF00332 | PFAM:PF07983 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | UniProt:Q9FJX7 | SMART:SM00768 | SignalP:SignalP-noTM |
| UniParc:UPI00000A72D4 | InterPro:X8 | SEG:seg | : | : | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
Coordinates
chr5:-:26921584..26923488
Molecular Weight (calculated)
41998.0 Da
IEP (calculated)
8.160
GRAVY (calculated)
-0.243
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.