Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- vacuole 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 48.02 | 41.16 |
| Os10t0347000-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 38.42 | 39.53 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 42.94 | 38.48 |
| KRH77114 | Soybean | extracellular, vacuole | 42.94 | 38.48 |
| GSMUA_Achr11P... | Banana | extracellular | 12.71 | 37.82 |
| KRH28365 | Soybean | vacuole | 42.09 | 37.44 |
| Bra031835.1-P | Field mustard | vacuole | 39.55 | 36.94 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 13.84 | 36.84 |
| CDY37850 | Canola | vacuole | 38.98 | 36.32 |
| CDY43577 | Canola | vacuole | 38.7 | 35.86 |
| GSMUA_Achr7P26650_001 | Banana | extracellular | 11.58 | 35.34 |
| AT5G67460.1 | Thale cress | vacuole | 37.57 | 35.0 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 11.86 | 34.71 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 14.41 | 34.23 |
| GSMUA_Achr8P33530_001 | Banana | cytosol, extracellular, plastid, vacuole | 19.49 | 33.5 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 12.99 | 32.17 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 11.86 | 30.0 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 28.25 | 27.1 |
| GSMUA_Achr6P00220_001 | Banana | nucleus | 22.88 | 26.73 |
| GSMUA_Achr8P28170_001 | Banana | extracellular | 11.58 | 26.45 |
| GSMUA_Achr4P23440_001 | Banana | cytosol | 10.73 | 25.33 |
| GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 12.71 | 25.0 |
| GSMUA_Achr9P07140_001 | Banana | extracellular | 12.15 | 23.12 |
| GSMUA_Achr10P... | Banana | extracellular | 11.3 | 22.6 |
| GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 12.15 | 22.4 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 11.58 | 22.28 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 14.97 | 22.27 |
| GSMUA_Achr5P08900_001 | Banana | extracellular | 11.86 | 22.11 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 11.86 | 21.99 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 11.02 | 21.79 |
| GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 12.43 | 18.11 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 20.06 | 15.14 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 19.21 | 12.9 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr10G11340_001 | EnsemblPlants:GSMUA_Achr10P11340_001 | EnsemblPlants:GSMUA_Achr10T11340_001 | InterPro:Glyco_hydro_17 | UniProt:M0RHB0 |
| PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 | TMHMM:TMhelix |
| UniParc:UPI000294B6A3 | InterPro:X8 | SEG:seg | : | : | : |
Description
glucan endo-1,3-beta-glucosidase-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G11340_001]
Coordinates
chr10:+:20827966..20833337
Molecular Weight (calculated)
38501.0 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.060
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTRSSQRES MIHMLRCPYI IFDLFCFAVL KIFTGQEGFE VVHLQEPDSH GKRPSVGVSV SDADLPVVSS NVLAAETWLR SHVLARYPST RITTIIVGRG
101: VHCNKSHEHQ WDFVLPSVKN LHYSLVRWGL VREIKVSAAF SADCLHQHSR VTLKPILGFL QESGSAYAID EPSFSAHQDA WKRLGISKPK DIRVKPSPPP
201: MIFPSPPDGS FSFPPDASPA LVPPASPPDV FLASPPTCLP TPAAPAPGSG EGQKVGLWCV AKPTVPMEKL QEAMDYACGE GGANCEEIGP DGSCYYPDNV
301: VAHASYAFNS YWQKTKQSGG SCSFDSTAVL INSDPSMCLF ASFALLSLIH VSKL
101: VHCNKSHEHQ WDFVLPSVKN LHYSLVRWGL VREIKVSAAF SADCLHQHSR VTLKPILGFL QESGSAYAID EPSFSAHQDA WKRLGISKPK DIRVKPSPPP
201: MIFPSPPDGS FSFPPDASPA LVPPASPPDV FLASPPTCLP TPAAPAPGSG EGQKVGLWCV AKPTVPMEKL QEAMDYACGE GGANCEEIGP DGSCYYPDNV
301: VAHASYAFNS YWQKTKQSGG SCSFDSTAVL INSDPSMCLF ASFALLSLIH VSKL
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.