Factsheet for GSMUA_Achr4P14960_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	49.58	79.19
VIT_12s0028g00050.t01	Wine grape	extracellular	41.6	41.25
PGSC0003DMT400044716	Potato	extracellular	41.18	40.16
Solyc07g056310.2.1	Tomato	extracellular	41.6	40.08
KRH14480	Soybean	extracellular	42.02	38.91
GSMUA_Achr7P07950_001	Banana	extracellular	21.43	38.35
VIT_10s0003g02720.t01	Wine grape	plastid	31.09	37.95
KRH73630	Soybean	extracellular	40.76	37.6
KRG98922	Soybean	extracellular	39.92	37.11
KRH46050	Soybean	extracellular	39.5	36.72
GSMUA_Achr7P26650_001	Banana	extracellular	17.65	36.21
GSMUA_Achr11P...	Banana	extracellular	18.07	36.13
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	21.43	35.66
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	31.51	34.56
EES20007	Sorghum	extracellular, vacuole	34.87	33.6
Zm00001d009686_P002	Maize	extracellular	34.03	33.06
GSMUA_Achr9P09230_001	Banana	extracellular	16.81	33.06
KRH42964	Soybean	extracellular	38.24	32.97
GSMUA_Achr3P16040_001	Banana	mitochondrion	19.33	32.86
KRH59086	Soybean	cytosol, mitochondrion, nucleus	32.77	31.58
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	34.03	31.27
KRH59084	Soybean	extracellular	31.93	30.28
KRH12824	Soybean	extracellular, vacuole	40.34	29.63
HORVU1Hr1G091830.4	Barley	extracellular	32.77	29.55
TraesCS1B01G451800.1	Wheat	endoplasmic reticulum, plasma membrane	32.77	29.32
Os01t0631500-01	Rice	extracellular	34.03	29.03
TraesCS1A01G420600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	32.77	29.0
KRH37784	Soybean	extracellular	39.5	28.83
GSMUA_Achr4P23440_001	Banana	cytosol	18.07	28.67
Os05t0581900-01	Rice	extracellular	33.61	28.47
GSMUA_Achr8P28170_001	Banana	extracellular	18.49	28.39
Solyc02g071200.2.1	Tomato	extracellular	35.29	27.72
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	21.85	27.23
Bra010831.1-P	Field mustard	nucleus	32.77	27.08
GSMUA_Achr5P08900_001	Banana	extracellular	21.43	26.84
EES01128	Sorghum	extracellular	34.87	26.77
Zm00001d011431_P001	Maize	plasma membrane	34.45	26.54
CDY43335	Canola	extracellular	32.77	26.44
CDX99818	Canola	extracellular	32.35	26.1
GSMUA_Achr6P27540_001	Banana	extracellular	20.17	26.09
CDY48334	Canola	vacuole	33.19	25.16
CDX90189	Canola	extracellular	32.77	24.84
GSMUA_Achr9P07140_001	Banana	extracellular	19.33	24.73
GSMUA_Achr9P07170_001	Banana	extracellular	18.49	24.58
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.49	24.44
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	19.33	23.96
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	20.59	23.79
GSMUA_Achr10P...	Banana	extracellular	17.65	23.73
AT1G29380.1	Thale cress	extracellular	31.09	23.49
TraesCS3A01G227300.1	Wheat	extracellular	32.35	23.12
TraesCS3B01G257100.1	Wheat	extracellular	32.77	22.87
HORVU3Hr1G056800.1	Barley	extracellular	32.77	21.97
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	21.43	20.99
Bra032314.1-P	Field mustard	plastid	33.19	20.84
GSMUA_Achr2P02010_001	Banana	cytosol	34.03	17.27
GSMUA_Achr6P00220_001	Banana	nucleus	21.43	16.83
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	35.71	16.13
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	22.27	14.97

Protein Annotations

EnsemblPlants:GSMUA_Achr4P14960_001	EnsemblPlants:GSMUA_Achr4T14960_001	EnsemblPlantsGene:GSMUA_Achr4G14960_001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SMART:SM00768	UniParc:UPI00029482BF	UniProt:M0SP11	MapMan:35.1

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G14960_001]

Coordinates

chr4:-:11276744..11277669

Molecular Weight (calculated)

25307.3 Da

IEP (calculated)

4.505

GRAVY (calculated)

-0.340

Length

238 amino acids

Sequence
(BLAST)

001: MAIKSSKLCT CICYHQFLQI VSAGVVAKGS EDGLSSGPSL ARTTDSNKEM VYEPGKQFNR FLLAETELQS SKTMPEMDVV TPITTVPVLN PTITTPTTTT
101: PDYNPFPTTS TTPTTDPYST PAMVTPSSSS SSSQSWCVAS QTASKTGLQV ALDYACGYGG ADCSAIQEGG SCYNPNTVRD HASYAFNEYY QKNPIPTSCD
201: FGGTAVITNV DPSQSNSESN NDLTHPPVLD LGAHLRNV

Best Arabidopsis Sequence Match ( AT2G30933.1 )
(BLAST)

001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.