Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G227300.1 | Wheat | extracellular | 86.48 | 92.19 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 86.48 | 90.03 |
| Os01t0631500-01 | Rice | extracellular | 54.65 | 69.53 |
| EES01128 | Sorghum | extracellular | 58.59 | 67.1 |
| Zm00001d011431_P001 | Maize | plasma membrane | 57.18 | 65.7 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 22.25 | 53.02 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 30.99 | 41.67 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 22.54 | 41.03 |
| Bra010831.1-P | Field mustard | nucleus | 31.27 | 38.54 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 25.63 | 37.92 |
| PGSC0003DMT400044716 | Potato | extracellular | 25.35 | 36.89 |
| CDX99818 | Canola | extracellular | 30.42 | 36.61 |
| AT1G29380.1 | Thale cress | extracellular | 31.83 | 35.87 |
| CDY48334 | Canola | vacuole | 31.55 | 35.67 |
| Solyc07g056310.2.1 | Tomato | extracellular | 24.79 | 35.63 |
| KRG98922 | Soybean | extracellular | 25.35 | 35.16 |
| KRH42964 | Soybean | extracellular | 27.04 | 34.78 |
| KRH46050 | Soybean | extracellular | 25.07 | 34.77 |
| KRH73630 | Soybean | extracellular | 25.07 | 34.5 |
| KRH14480 | Soybean | extracellular | 24.79 | 34.24 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 23.38 | 33.6 |
| CDX90189 | Canola | extracellular | 29.58 | 33.44 |
| KRH12824 | Soybean | extracellular, vacuole | 30.42 | 33.33 |
| KRH37784 | Soybean | extracellular | 30.14 | 32.82 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 21.97 | 32.77 |
| KRH59084 | Soybean | extracellular | 23.1 | 32.67 |
| CDY43335 | Canola | extracellular | 27.04 | 32.54 |
| HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 11.55 | 32.54 |
| Solyc02g071200.2.1 | Tomato | extracellular | 27.32 | 32.01 |
| Bra032314.1-P | Field mustard | plastid | 33.24 | 31.13 |
| CDX97778 | Canola | extracellular | 20.0 | 31.0 |
| CDY29629 | Canola | extracellular | 20.0 | 31.0 |
| HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 17.75 | 29.86 |
| AT2G30933.1 | Thale cress | extracellular | 18.87 | 29.52 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 10.7 | 28.57 |
| HORVU5Hr1G089770.2 | Barley | plastid | 14.65 | 26.94 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 21.13 | 24.83 |
| HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 15.77 | 24.78 |
| HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 20.0 | 24.4 |
| HORVU2Hr1G099430.1 | Barley | plastid | 15.49 | 23.91 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 14.37 | 22.87 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 16.9 | 22.39 |
| HORVU0Hr1G021440.2 | Barley | plastid | 9.58 | 21.52 |
| HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 17.75 | 21.21 |
| HORVU5Hr1G096090.6 | Barley | plastid | 13.52 | 20.51 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 20.0 | 17.11 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G056800.1 | EnsemblPlantsGene:HORVU3Hr1G056800 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | UniParc:UPI000294BA9D | UniProt:M0XV15 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr3H:+:424845319..424847429
Molecular Weight (calculated)
33881.6 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.034
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFLRPSNC IGAYLLVLLA FCCCGTEQRR VEASNRLTQH PRILTTVSVM KPSYPTITTP TSASYAMPAY TPMTPSSRFP SLADDNGGGD IGGGGIGGGG
101: ATGGGGTAGG AAGGATGGGG TAGGATGGGG TAGGAAGGAT GGGGTAGGGV GGGGAAGGGG GGGTWCVASQ SASTSALQVA LDYACGYSGV DCSAIQTGGS
201: CFSPDTIHDH ASYAFNSYYQ KNPLPTSCDF GGTATITTTD PSSGSCQYPA SSGGAQGMMP PPSPTALTPT TPMTPTPMTP MTPTPMTPDT PSTGTPMYGS
301: SSPPDFGSMS PPGGLGSNSP PDYSDVGAAP ATAMGRATLA IVIILAATLS MSLAT
101: ATGGGGTAGG AAGGATGGGG TAGGATGGGG TAGGAAGGAT GGGGTAGGGV GGGGAAGGGG GGGTWCVASQ SASTSALQVA LDYACGYSGV DCSAIQTGGS
201: CFSPDTIHDH ASYAFNSYYQ KNPLPTSCDF GGTATITTTD PSSGSCQYPA SSGGAQGMMP PPSPTALTPT TPMTPTPMTP MTPTPMTPDT PSTGTPMYGS
301: SSPPDFGSMS PPGGLGSNSP PDYSDVGAAP ATAMGRATLA IVIILAATLS MSLAT
001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
Arabidopsis Description
Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.