Factsheet for HORVU5Hr1G095450.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G400600.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	87.22	83.45
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	84.96	82.48
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	84.21	80.58
GSMUA_Achr9P09230_001	Banana	extracellular	54.14	59.5
GSMUA_Achr11P...	Banana	extracellular	51.13	57.14
VIT_12s0057g00700.t01	Wine grape	extracellular	45.11	51.28
PGSC0003DMT400015724	Potato	extracellular	43.61	50.88
CDY47296	Canola	extracellular	45.11	50.42
Bra035382.1-P	Field mustard	extracellular	44.36	49.58
CDX74636	Canola	extracellular	44.36	49.58
Solyc07g047710.2.1	Tomato	extracellular	42.11	49.12
AT5G35740.1	Thale cress	extracellular	43.61	48.74
KRH51177	Soybean	extracellular	42.11	48.28
KRH14105	Soybean	extracellular	41.35	46.61
KRH74013	Soybean	extracellular	39.85	44.92
Solyc11g012580.1.1	Tomato	extracellular	39.1	44.44
PGSC0003DMT400034582	Potato	extracellular	38.35	43.97
AT2G04910.1	Thale cress	extracellular	35.34	37.9
CDY05067	Canola	endoplasmic reticulum, extracellular	32.33	34.68
CDY72034	Canola	endoplasmic reticulum, extracellular	30.83	33.88
CDX90730	Canola	endoplasmic reticulum, extracellular	30.08	32.0
HORVU4Hr1G028360.1	Barley	peroxisome, plastid	20.3	21.43
HORVU0Hr1G021440.2	Barley	plastid	24.81	20.89
HORVU7Hr1G108980.1	Barley	extracellular	29.32	17.49
HORVU5Hr1G089770.2	Barley	plastid	24.81	17.1
HORVU1Hr1G091830.4	Barley	extracellular	33.08	16.67
HORVU1Hr1G077100.2	Barley	endoplasmic reticulum, extracellular, vacuole	26.32	16.59
HORVU2Hr1G099430.1	Barley	plastid	27.82	16.09
HORVU6Hr1G019780.4	Barley	endoplasmic reticulum, extracellular	27.07	15.93
HORVU5Hr1G109550.1	Barley	cytosol, plastid	30.83	15.3
HORVU5Hr1G096090.6	Barley	plastid	26.32	14.96
HORVU2Hr1G033470.1	Barley	cytosol, plastid	27.07	12.12
HORVU3Hr1G074010.3	Barley	cytosol, plastid	25.56	11.68
HORVU3Hr1G056800.1	Barley	extracellular	28.57	10.7
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	30.83	9.88

Protein Annotations

EnsemblPlants:HORVU5Hr1G095450.3	EnsemblPlantsGene:HORVU5Hr1G095450	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI0002958545	UniProt:M0WVI3	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:-:598315514..598317025

Molecular Weight (calculated)

14978.8 Da

IEP (calculated)

7.204

GRAVY (calculated)

-0.313

Length

133 amino acids

Sequence
(BLAST)

001: MRTYLPPSAG RVKNCDLRNQ AATRLMLLLY FILHFAAVSA QQEDGNWEKQ WCIEDEQRPD GILQIALSWA CGPGGADCTM IEPNKSCYLP NTVRDDASYA
101: FNSYWQKYKK HGGSCYFNAA AMVTNLNPSM SII

Best Arabidopsis Sequence Match ( AT5G35740.1 )
(BLAST)

001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP

Arabidopsis Description

At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.