Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 62.69 | 92.31 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 62.31 | 91.76 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 61.19 | 90.11 |
| Zm00001d050544_P001 | Maize | extracellular | 47.39 | 67.91 |
| EES05109 | Sorghum | extracellular, plasma membrane | 48.51 | 67.71 |
| Zm00001d016545_P001 | Maize | extracellular | 46.27 | 66.31 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 27.99 | 53.57 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 35.07 | 51.09 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 26.87 | 38.3 |
| CDY01142 | Canola | extracellular | 26.87 | 38.1 |
| KRH31583 | Soybean | extracellular | 27.24 | 38.02 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 28.73 | 37.75 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 27.61 | 37.56 |
| KRH42801 | Soybean | extracellular | 26.87 | 37.5 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 26.49 | 37.17 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 25.75 | 36.9 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 27.24 | 36.87 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 31.34 | 36.36 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 29.48 | 35.91 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 23.88 | 35.75 |
| HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 15.3 | 32.54 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 15.3 | 30.83 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 23.51 | 30.43 |
| HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 22.39 | 28.44 |
| HORVU0Hr1G021440.2 | Barley | plastid | 15.67 | 26.58 |
| HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 19.78 | 23.45 |
| HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 25.37 | 23.37 |
| HORVU5Hr1G096090.6 | Barley | plastid | 19.78 | 22.65 |
| HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 25.0 | 22.56 |
| HORVU5Hr1G089770.2 | Barley | plastid | 15.67 | 21.76 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 21.27 | 21.59 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 17.91 | 21.52 |
| HORVU2Hr1G099430.1 | Barley | plastid | 16.79 | 19.57 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 22.39 | 16.9 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 20.52 | 13.25 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G109550.1 | EnsemblPlantsGene:HORVU5Hr1G109550 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:X8 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 | SEG:seg | SMART:SM00768 | TMHMM:TMhelix |
| UniParc:UPI000B46EB99 | UniProt:A0A287SP54 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:630211054..630213088
Molecular Weight (calculated)
28413.6 Da
IEP (calculated)
9.042
GRAVY (calculated)
-0.153
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: RVSSLLSPVV IRQPPKEKQS KEKKAVLHGD GEGDPPPPGS LPRSHHLSFS YSLPTTAHIF PPPLLFFFLL LGSPRTLHAP RRLPTYMRRR RSPLAALWLA
101: AVWALQLLAS AGAANPTWCI VRTGASVKTV QAALDYACSP AGGADCAPIQ ASGLCYLPNT LAAHASYAFN SVYQRSRAAP GACDFAGTAT VTLTDPSYGS
201: CTYPSSPSTA GSPGSAGSTS RPPPGNRKPD LGSDDDDSDA DQAHVATTNA PFMSLALSCF VYLHLRWW
101: AVWALQLLAS AGAANPTWCI VRTGASVKTV QAALDYACSP AGGADCAPIQ ASGLCYLPNT LAAHASYAFN SVYQRSRAAP GACDFAGTAT VTLTDPSYGS
201: CTYPSSPSTA GSPGSAGSTS RPPPGNRKPD LGSDDDDSDA DQAHVATTNA PFMSLALSCF VYLHLRWW
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.