CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01142	Canola	extracellular	94.12	93.12
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	91.44	82.61
AT4G13600.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	80.21	64.94
KRH42801	Soybean	extracellular	48.13	46.88
Solyc09g091920.2.1	Tomato	endoplasmic reticulum, extracellular	48.66	46.19
PGSC0003DMT400080365	Potato	endoplasmic reticulum, extracellular	49.73	45.59
KRH58889	Soybean	endoplasmic reticulum, extracellular	45.99	45.03
EES05109	Sorghum	extracellular, plasma membrane	42.25	41.15
GSMUA_Achr3P16040_001	Banana	mitochondrion	30.48	40.71
Zm00001d050544_P001	Maize	extracellular	40.64	40.64
CDX74636	Canola	extracellular	25.67	40.34
CDY47296	Canola	extracellular	25.67	40.34
Zm00001d016545_P001	Maize	extracellular	40.11	40.11
PGSC0003DMT400011608	Potato	mitochondrion	39.57	39.36
GSMUA_Achr6P27540_001	Banana	extracellular	38.5	39.13
VIT_05s0029g00190.t01	Wine grape	extracellular	45.45	38.64
Solyc12g098410.1.1	Tomato	endoplasmic reticulum, extracellular	40.11	37.88
TraesCS5A01G456400.1	Wheat	extracellular, plasma membrane	35.83	36.81
CDY56715	Canola	cytosol	21.93	36.28
TraesCS5D01G467200.1	Wheat	extracellular, plasma membrane	35.29	36.26
TraesCS5B01G465400.1	Wheat	extracellular, plasma membrane	35.29	36.26
CDY16115	Canola	extracellular	29.41	35.48
CDY05067	Canola	endoplasmic reticulum, extracellular	21.93	33.06
CDY72034	Canola	endoplasmic reticulum, extracellular	21.39	33.06
CDY51213	Canola	extracellular	28.34	32.92
CDY26741	Canola	extracellular	32.09	32.26
CDX83826	Canola	extracellular	31.55	32.07
CDX90730	Canola	endoplasmic reticulum, extracellular	21.39	32.0
CDY65418	Canola	cytosol	25.13	31.97
CDX96707	Canola	extracellular	31.55	31.89
CDY02987	Canola	extracellular	27.27	31.68
CDY19232	Canola	extracellular	31.55	31.38
CDY16822	Canola	extracellular	33.16	31.16
CDY16114	Canola	extracellular	29.41	30.73
CDY33795	Canola	extracellular	29.41	30.73
CDX87201	Canola	extracellular	32.62	30.65
CDY23085	Canola	extracellular, plasma membrane, vacuole	31.55	30.57
CDY02169	Canola	extracellular	31.55	30.41
CDY21992	Canola	cytosol	22.99	30.28
CDY48582	Canola	cytosol	22.99	30.28
GSMUA_Achr9P07170_001	Banana	extracellular	28.88	30.17
CDY42854	Canola	extracellular	31.02	29.74
CDX96880	Canola	extracellular	26.74	29.07
CDY34558	Canola	extracellular	26.74	29.07
CDX98134	Canola	extracellular	29.41	28.8
CDY36415	Canola	extracellular	28.88	27.55
CDX69983	Canola	extracellular	31.02	27.36
CDY54140	Canola	extracellular	29.95	26.79
CDY04273	Canola	extracellular	30.48	26.15
CDY07353	Canola	extracellular	30.48	26.15
CDY50312	Canola	extracellular	29.95	26.05
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	27.27	26.02
HORVU5Hr1G109550.1	Barley	cytosol, plastid	36.9	25.75
CDY65205	Canola	plasma membrane	26.74	25.25
CDX99038	Canola	extracellular	31.55	25.11
CDY56240	Canola	extracellular	22.99	24.86
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.46	24.71
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	29.95	23.63
CDY29629	Canola	extracellular	28.88	23.58
CDX97778	Canola	extracellular	28.88	23.58
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.93	22.91
CDY70929	Canola	extracellular	21.39	22.22
CDY43335	Canola	extracellular	32.09	20.34
CDX99818	Canola	extracellular	31.55	20.0
CDX90189	Canola	extracellular	32.09	19.11
CDY48334	Canola	vacuole	31.55	18.79
CDX94970	Canola	plastid	29.41	18.58
CDY64750	Canola	endoplasmic reticulum, vacuole	28.88	17.94
CDY31085	Canola	plastid	29.41	15.67
CDY47016	Canola	extracellular	30.48	15.32
CDY32184	Canola	vacuole	28.88	15.3
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	24.6	14.7
CDY37850	Canola	vacuole	24.6	12.11
CDY43577	Canola	vacuole	24.6	12.04
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	24.6	11.95
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	24.6	11.83

Protein Annotations

EnsemblPlants:CDY47357	EnsemblPlantsGene:GSBRNA2T00087238001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	PFAM:PF07983
ProteinID:CDY47357	ProteinID:CDY47357.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI0004EDFAF0
UniProt:A0A078IB17	MapMan:35.1	:	:	:	:

Description

BnaCnng14940DBnaCnng14940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB17]

Coordinates

chrLK032712:+:22965..24884

Molecular Weight (calculated)

18961.2 Da

IEP (calculated)

6.462

GRAVY (calculated)

0.206

Length

187 amino acids

Sequence
(BLAST)

001: MALYLQSLSI ILFLLLPSST AMWCVARFDV TSQALQSALD YACAAGADCA PIQSTGLCFL PNTIQAHASY AFNSYFQRRA MAPGSCNFAG TSTIAKTDPS
101: YGSCVYPNSL SNAGGSASTT TVGGTPTATA GNIPVTSLRP PSGTTASPFG IGGNGLIPPG ITNTDESGAY INTSTVSVSP WGVASGH

Best Arabidopsis Sequence Match ( AT4G13600.1 )
(BLAST)

001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.