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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035382.1-P Field mustard extracellular 100.0 100.0
CDY47296 Canola extracellular 94.96 94.96
AT5G35740.1 Thale cress extracellular 86.55 86.55
VIT_12s0057g00700.t01 Wine grape extracellular 68.91 70.09
KRH14105 Soybean extracellular 67.23 67.8
KRH74013 Soybean extracellular 65.55 66.1
KRH51177 Soybean extracellular 63.87 65.52
PGSC0003DMT400015724 Potato extracellular 59.66 62.28
Solyc07g047710.2.1 Tomato extracellular 57.14 59.65
GSMUA_Achr11P... Banana extracellular 55.46 55.46
GSMUA_Achr9P09230_001 Banana extracellular 55.46 54.55
Solyc11g012580.1.1 Tomato extracellular 52.94 53.85
PGSC0003DMT400034582 Potato extracellular 51.26 52.59
TraesCS5D01G400600.1 Wheat endoplasmic reticulum, extracellular, mitochondrion, nucleus 55.46 47.48
TraesCS5B01G395600.1 Wheat cytosol, extracellular, mitochondrion, plastid 54.62 47.45
TraesCS5A01G390800.1 Wheat endoplasmic reticulum, extracellular, mitochondrion, nucleus 52.94 45.32
HORVU5Hr1G095450.3 Barley extracellular 49.58 44.36
CDY05067 Canola endoplasmic reticulum, extracellular 45.38 43.55
CDX90730 Canola endoplasmic reticulum, extracellular 44.54 42.4
CDY72034 Canola endoplasmic reticulum, extracellular 42.02 41.32
CDY56715 Canola cytosol 34.45 36.28
CDY21992 Canola cytosol 35.29 29.58
CDY48582 Canola cytosol 35.29 29.58
CDY01142 Canola extracellular 41.18 25.93
CDY47357 Canola endoplasmic reticulum, extracellular 40.34 25.67
CDY16115 Canola extracellular 31.93 24.52
CDY65205 Canola plasma membrane 37.82 22.73
CDY29629 Canola extracellular 43.7 22.71
CDX97778 Canola extracellular 43.7 22.71
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 31.93 22.35
CDX96707 Canola extracellular 34.45 22.16
CDX96880 Canola extracellular 31.93 22.09
CDY34558 Canola extracellular 31.93 22.09
CDY26741 Canola extracellular 34.45 22.04
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 36.13 21.94
CDY19232 Canola extracellular 34.45 21.81
CDX83826 Canola extracellular 33.61 21.74
CDY56240 Canola extracellular 31.09 21.39
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 31.93 21.23
CDY54140 Canola extracellular 36.97 21.05
CDY33795 Canola extracellular 31.09 20.67
CDY16114 Canola extracellular 31.09 20.67
CDY07353 Canola extracellular 37.82 20.64
CDY04273 Canola extracellular 37.82 20.64
CDY70929 Canola extracellular 31.09 20.56
CDY02987 Canola extracellular 27.73 20.5
CDY51213 Canola extracellular 27.73 20.5
CDY50312 Canola extracellular 36.97 20.47
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 39.5 19.83
CDY65418 Canola cytosol 24.37 19.73
CDX98134 Canola extracellular 31.09 19.37
CDX87201 Canola extracellular 31.93 19.1
CDY16822 Canola extracellular 31.93 19.1
CDY02169 Canola extracellular 31.09 19.07
CDY42854 Canola extracellular 31.09 18.97
CDY23085 Canola extracellular, plasma membrane, vacuole 30.25 18.65
CDY36415 Canola extracellular 30.25 18.37
CDY43335 Canola extracellular 45.38 18.31
CDX99818 Canola extracellular 45.38 18.31
CDX69983 Canola extracellular 31.09 17.45
CDY48334 Canola vacuole 45.38 17.2
CDX90189 Canola extracellular 45.38 17.2
CDX99038 Canola extracellular 31.09 15.74
CDX94970 Canola plastid 37.82 15.2
CDY64750 Canola endoplasmic reticulum, vacuole 37.82 14.95
CDY56795 Canola cytosol, nucleus, plastid, vacuole 36.13 13.74
CDY31085 Canola plastid 36.13 12.25
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 39.5 12.21
CDY32184 Canola vacuole 36.13 12.18
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 39.5 12.08
CDY37850 Canola vacuole 36.97 11.58
CDY43577 Canola vacuole 36.97 11.52
CDY47016 Canola extracellular 31.09 9.95
Protein Annotations
EnsemblPlants:CDX74636EnsemblPlantsGene:GSBRNA2T00114621001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF118PFAM:PF07983
ProteinID:CDX74636ProteinID:CDX74636.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI000253E62B
MapMan:35.1:::::
Description
BnaA04g07530D
Coordinates
chrLK031801:+:2310769..2311310
Molecular Weight (calculated)
13241.6 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.316
Length
119 amino acids
Sequence
(BLAST)
001: MSTFLMRILL ALLVLALAIP QQSAAESEQW CIADEQTPDD ELQAALDWAC SKGGADCSKM QQQNQPCFLP NTIRDHASVA FNSYYQTYKH KGGSCYFKGA
101: AMITELDPSH GSCHYEYKP
Best Arabidopsis Sequence Match ( AT5G35740.1 )
(BLAST)
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.