Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 96.35 | 94.96 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 94.16 | 92.81 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 82.48 | 84.96 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 59.12 | 66.94 |
| GSMUA_Achr11P... | Banana | extracellular | 54.01 | 62.18 |
| CDY47296 | Canola | extracellular | 49.63 | 57.14 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 48.18 | 56.41 |
| AT5G35740.1 | Thale cress | extracellular | 48.91 | 56.3 |
| KRH51177 | Soybean | extracellular | 47.45 | 56.03 |
| PGSC0003DMT400015724 | Potato | extracellular | 45.99 | 55.26 |
| Bra035382.1-P | Field mustard | extracellular | 47.45 | 54.62 |
| CDX74636 | Canola | extracellular | 47.45 | 54.62 |
| Solyc07g047710.2.1 | Tomato | extracellular | 45.26 | 54.39 |
| KRH14105 | Soybean | extracellular | 43.8 | 50.85 |
| Solyc11g012580.1.1 | Tomato | extracellular | 43.07 | 50.43 |
| PGSC0003DMT400034582 | Potato | extracellular | 42.34 | 50.0 |
| KRH74013 | Soybean | extracellular | 42.34 | 49.15 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 35.04 | 38.71 |
| AT2G04910.1 | Thale cress | extracellular | 35.04 | 38.71 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 35.04 | 38.4 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 31.39 | 35.54 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 30.66 | 25.61 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 29.2 | 25.32 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 31.39 | 24.86 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 32.12 | 24.18 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 29.93 | 23.03 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.47 | 19.7 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 29.93 | 18.47 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.77 | 18.42 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 27.01 | 18.05 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 27.01 | 17.7 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 33.58 | 13.94 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 33.58 | 12.89 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 25.55 | 12.73 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 31.39 | 12.61 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 32.12 | 10.78 |
| TraesCS5B01G366600.1 | Wheat | plastid | 27.74 | 8.96 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G395600.1 | EnsemblPlantsGene:TraesCS5B01G395600 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:572944574..572946178
Molecular Weight (calculated)
15562.3 Da
IEP (calculated)
7.335
GRAVY (calculated)
-0.386
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MHTYLPPSAA RVKNCYLKKQ AATRLLLYFI LHFATVSAQQ EDRNWEKQWC IADEQTPDDI LQIALSWACG PGGADCTMIE PNKSCYLPNT VRDHASYAFN
101: SYWQKYKNHA GSCYFNAAAM VTDLNPSRNS CNFEVVP
101: SYWQKYKNHA GSCYFNAAAM VTDLNPSRNS CNFEVVP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.