Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 97.25 | 97.25 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 96.7 | 96.7 |
| Zm00001d050544_P001 | Maize | extracellular | 64.84 | 63.1 |
| EES05109 | Sorghum | extracellular, plasma membrane | 66.48 | 63.02 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 92.31 | 62.69 |
| Zm00001d016545_P001 | Maize | extracellular | 64.29 | 62.57 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 39.01 | 50.71 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 50.55 | 50.0 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 36.81 | 40.85 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 34.62 | 39.87 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 39.01 | 37.77 |
| CDY01142 | Canola | extracellular | 37.91 | 36.51 |
| KRH42801 | Soybean | extracellular | 38.46 | 36.46 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 39.56 | 36.36 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 37.91 | 36.13 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 39.01 | 36.04 |
| KRH31583 | Soybean | extracellular | 37.36 | 35.42 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 39.56 | 35.29 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 36.26 | 35.29 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 34.07 | 34.64 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 39.56 | 32.73 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 24.18 | 32.12 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 39.01 | 30.74 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 28.57 | 30.06 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 34.07 | 29.95 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 28.02 | 28.65 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.77 | 27.32 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.12 | 26.77 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.67 | 25.84 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 34.07 | 22.55 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 31.32 | 21.43 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 25.82 | 21.17 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 31.87 | 17.01 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 28.57 | 15.76 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 25.82 | 13.17 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 27.47 | 12.25 |
| TraesCS5B01G366600.1 | Wheat | plastid | 23.08 | 9.91 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G465400.1 | EnsemblPlantsGene:TraesCS5B01G465400 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF147 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:+:639754859..639756720
Molecular Weight (calculated)
18799.0 Da
IEP (calculated)
6.882
GRAVY (calculated)
-0.001
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRRRSPLAA LWLAAAWALQ LLAGAGAANP TWCIVRTGAP VKTVQAALDY ACSPAGGADC APIQASALCY LPNTLAAHAS YAFNSVYQRS HAAPGACDFA
101: GTATVTLTDP SYGSCTFPAS PGAAGSPGSA TSTSRPPPGN RKPDLGSDDD DPDTDEAHVA TANAPFMSLA LSCFVYLHLR WW
101: GTATVTLTDP SYGSCTFPAS PGAAGSPGSA TSTSRPPPGN RKPDLGSDDD DPDTDEAHVA TANAPFMSLA LSCFVYLHLR WW
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.