Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 88.24 | 91.37 |
| CDY01142 | Canola | extracellular | 46.57 | 50.26 |
| CDY47357 | Canola | endoplasmic reticulum, extracellular | 45.59 | 49.73 |
| KRH58889 | Soybean | endoplasmic reticulum, extracellular | 45.1 | 48.17 |
| KRH42801 | Soybean | extracellular | 44.61 | 47.4 |
| GSMUA_Achr3P16040_001 | Banana | mitochondrion | 30.88 | 45.0 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 47.55 | 44.09 |
| GSMUA_Achr6P27540_001 | Banana | extracellular | 39.22 | 43.48 |
| Zm00001d016545_P001 | Maize | extracellular | 39.71 | 43.32 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 39.71 | 43.09 |
| Zm00001d050544_P001 | Maize | extracellular | 39.22 | 42.78 |
| EES05109 | Sorghum | extracellular, plasma membrane | 39.71 | 42.19 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 36.27 | 40.66 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 36.27 | 40.66 |
| Bra032719.1-P | Field mustard | endoplasmic reticulum, extracellular | 41.18 | 40.58 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 45.1 | 39.83 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 35.29 | 39.56 |
| PGSC0003DMT400045877 | Potato | extracellular | 20.59 | 39.25 |
| PGSC0003DMT400015724 | Potato | extracellular | 20.59 | 36.84 |
| PGSC0003DMT400059279 | Potato | cytosol | 21.08 | 36.13 |
| PGSC0003DMT400034582 | Potato | extracellular | 19.12 | 33.62 |
| PGSC0003DMT400063348 | Potato | extracellular | 30.39 | 33.51 |
| GSMUA_Achr9P07170_001 | Banana | extracellular | 28.43 | 32.4 |
| PGSC0003DMT400003054 | Potato | extracellular | 27.45 | 29.32 |
| PGSC0003DMT400072939 | Potato | extracellular | 29.41 | 29.13 |
| HORVU5Hr1G109550.1 | Barley | cytosol, plastid | 37.75 | 28.73 |
| PGSC0003DMT400044716 | Potato | extracellular | 28.92 | 24.18 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 28.92 | 16.3 |
| PGSC0003DMT400025000 | Potato | nucleus | 21.57 | 15.83 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 23.53 | 13.87 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 21.57 | 11.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400080365 | EnsemblPlantsGene:PGSC0003DMG400031290 | EntrezGene:102579423 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF147 | PFAM:PF07983 | PGSC:PGSC0003DMG400031290 | RefSeq:XP_006366854.1 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | TMHMM:TMhelix | UniParc:UPI000296645D | UniProt:M1D3E3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Glucan endo-1,3-beta-glucosidase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400031290]
Coordinates
chr9:-:58909647..58912138
Molecular Weight (calculated)
21480.4 Da
IEP (calculated)
7.462
GRAVY (calculated)
-0.031
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPPPFHFL FLVIILLHLS ILNHVKATWC VARSDASEQS LQNALDYACF SGADCAPVLE NGLCYLPNTI QAHASYAFNG FYQRMNRAPG SCDFAGTATI
101: AKTDPSYGSC VYPASPSTAG GSTTTTTPST PGGGTGGTTN TTPIRYPPPP PGTALPLNSN GGTTPRGGPG IPDSETSNAS YNKYSNLVHV AFFMLLFLHV
201: FQLL
101: AKTDPSYGSC VYPASPSTAG GSTTTTTPST PGGGTGGTTN TTPIRYPPPP PGTALPLNSN GGTTPRGGPG IPDSETSNAS YNKYSNLVHV AFFMLLFLHV
201: FQLL
001: MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
101: TVQAHASYAF NSYFQRAAMA PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS GTTTSPFGIG GGGLNPQGTT
201: TTTNTDESGS YIINKSTVSI ALFVALLLWF I
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JT39]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.