Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g012580.1.1 | Tomato | extracellular | 88.79 | 88.03 |
| KRH51177 | Soybean | extracellular | 61.21 | 61.21 |
| AT5G35740.1 | Thale cress | extracellular | 54.31 | 52.94 |
| GSMUA_Achr11P... | Banana | extracellular | 53.45 | 52.1 |
| CDY47296 | Canola | extracellular | 53.45 | 52.1 |
| PGSC0003DMT400015724 | Potato | extracellular | 50.86 | 51.75 |
| CDX74636 | Canola | extracellular | 52.59 | 51.26 |
| Bra035382.1-P | Field mustard | extracellular | 52.59 | 51.26 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 50.0 | 47.93 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 50.86 | 42.45 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 50.0 | 42.34 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 43.97 | 40.8 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 43.1 | 40.32 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 48.28 | 40.29 |
| AT2G04910.1 | Thale cress | extracellular | 41.38 | 38.71 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 43.97 | 38.35 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 39.66 | 38.02 |
| PGSC0003DMT400059279 | Potato | cytosol | 33.62 | 32.77 |
| PGSC0003DMT400045877 | Potato | extracellular | 29.31 | 31.78 |
| PGSC0003DMT400063348 | Potato | extracellular | 32.76 | 20.54 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 31.03 | 19.15 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 33.62 | 19.12 |
| PGSC0003DMT400072939 | Potato | extracellular | 33.62 | 18.93 |
| PGSC0003DMT400003054 | Potato | extracellular | 31.03 | 18.85 |
| PGSC0003DMT400044716 | Potato | extracellular | 33.62 | 15.98 |
| PGSC0003DMT400025000 | Potato | nucleus | 31.9 | 13.31 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 35.34 | 11.85 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 33.62 | 10.77 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 35.34 | 10.38 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400034582 | EnsemblPlantsGene:PGSC0003DMG400013292 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| PGSC:PGSC0003DMG400013292 | SignalP:SignalP-noTM | SMART:SM00768 | UniParc:UPI000294F8AD | UniProt:M1B0Y4 | MapMan:35.1 |
Description
Hydrolase, hydrolyzing O-glycosyl compounds [Source:PGSC_GENE;Acc:PGSC0003DMG400013292]
Coordinates
chr11:-:354606..355972
Molecular Weight (calculated)
13261.8 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.189
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFGFIKILI VLIFFSIIPF KSEGQFHDWC IADEQTPDDE LVQALKWACE NGANCTKIQE NQPCYLPNTV KEHASYAFNS YYQNMKQKGA NCYFNSAALL
101: TARDPSHDVC KFEVIP
101: TARDPSHDVC KFEVIP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.