Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g047710.2.1 | Tomato | extracellular | 95.61 | 95.61 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 64.04 | 62.39 |
| CDY47296 | Canola | extracellular | 63.16 | 60.5 |
| Bra035382.1-P | Field mustard | extracellular | 62.28 | 59.66 |
| CDX74636 | Canola | extracellular | 62.28 | 59.66 |
| AT5G35740.1 | Thale cress | extracellular | 61.4 | 58.82 |
| KRH14105 | Soybean | extracellular | 58.77 | 56.78 |
| KRH74013 | Soybean | extracellular | 57.02 | 55.08 |
| GSMUA_Achr11P... | Banana | extracellular | 56.14 | 53.78 |
| PGSC0003DMT400034582 | Potato | extracellular | 51.75 | 50.86 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 53.51 | 50.41 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 56.14 | 46.04 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 55.26 | 45.99 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 54.39 | 44.6 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 50.88 | 43.61 |
| AT2G04910.1 | Thale cress | extracellular | 43.86 | 40.32 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 42.98 | 39.52 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 42.98 | 39.2 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 41.23 | 38.84 |
| PGSC0003DMT400059279 | Potato | cytosol | 32.46 | 31.09 |
| PGSC0003DMT400045877 | Potato | extracellular | 28.95 | 30.84 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 35.96 | 21.81 |
| PGSC0003DMT400063348 | Potato | extracellular | 34.21 | 21.08 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 36.84 | 20.59 |
| PGSC0003DMT400003054 | Potato | extracellular | 34.21 | 20.42 |
| PGSC0003DMT400072939 | Potato | extracellular | 36.84 | 20.39 |
| PGSC0003DMT400044716 | Potato | extracellular | 42.11 | 19.67 |
| PGSC0003DMT400025000 | Potato | nucleus | 35.96 | 14.75 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 42.11 | 13.26 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 39.47 | 13.01 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 42.11 | 12.15 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015724 | EnsemblPlantsGene:PGSC0003DMG400006143 | EntrezGene:102590162 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 |
| PFAM:PF07983 | PGSC:PGSC0003DMG400006143 | RefSeq:XP_006363003.1 | SignalP:SignalP-noTM | SMART:SM00768 | UniParc:UPI0002952B8B |
| UniProt:M1A6G2 | MapMan:35.1 | : | : | : | : |
Description
Glycosyl hydrolase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400006143]
Coordinates
chr7:-:44263380..44267693
Molecular Weight (calculated)
13002.4 Da
IEP (calculated)
6.222
GRAVY (calculated)
-0.350
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSFLALLL FMFLTKISVN GQLEEWCIAD EQTPDTELQV ALDWACGKGG ADCSKIQKDQ SCYYPNTVRD HASYAFNSYF QKYKKKGGTC FFNNAAMVIQ
101: VDPSHNSCHY EYMP
101: VDPSHNSCHY EYMP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.