Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 4
- cytosol 1
- vacuole 2
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51177 | Soybean | extracellular | 45.97 | 49.14 |
| AT5G35740.1 | Thale cress | extracellular | 46.77 | 48.74 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 45.97 | 48.72 |
| KRH14105 | Soybean | extracellular | 45.97 | 48.31 |
| KRH74013 | Soybean | extracellular | 45.16 | 47.46 |
| Solyc07g047710.2.1 | Tomato | extracellular | 41.94 | 45.61 |
| PGSC0003DMT400015724 | Potato | extracellular | 40.32 | 43.86 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 41.13 | 42.15 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 41.13 | 42.15 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 41.94 | 41.94 |
| PGSC0003DMT400034582 | Potato | extracellular | 38.71 | 41.38 |
| GSMUA_Achr11P... | Banana | extracellular | 39.52 | 41.18 |
| Solyc11g012580.1.1 | Tomato | extracellular | 38.71 | 41.03 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 41.13 | 40.8 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 37.9 | 35.34 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 39.52 | 35.25 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 38.71 | 35.04 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 37.1 | 33.09 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 31.45 | 23.21 |
| AT4G13600.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 37.9 | 20.35 |
| AT1G18650.1 | Thale cress | extracellular | 29.84 | 20.11 |
| AT2G03505.1 | Thale cress | extracellular | 25.0 | 18.45 |
| AT5G61130.1 | Thale cress | extracellular | 29.84 | 18.41 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 27.42 | 17.26 |
| AT2G30933.1 | Thale cress | extracellular | 31.45 | 17.18 |
| AT1G69295.1 | Thale cress | extracellular | 30.65 | 17.12 |
| AT5G08000.2 | Thale cress | extracellular | 29.03 | 16.9 |
| AT3G58100.2 | Thale cress | cytosol | 31.45 | 15.23 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 23.39 | 13.74 |
| AT1G29380.1 | Thale cress | extracellular | 34.68 | 13.65 |
| AT1G79480.1 | Thale cress | extracellular | 35.48 | 11.08 |
| AT5G67460.1 | Thale cress | vacuole | 31.45 | 10.26 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 25.81 | 9.7 |
Protein Annotations
| MapMan:35.1 | EntrezGene:815038 | UniProt:A0A178VVB3 | ProteinID:AAD25582.1 | ProteinID:AAM15338.1 | ProteinID:AEC05885.1 |
| ArrayExpress:AT2G04910 | EnsemblPlantsGene:AT2G04910 | RefSeq:AT2G04910 | TAIR:AT2G04910 | RefSeq:AT2G04910-TAIR-G | EnsemblPlants:AT2G04910.1 |
| TAIR:AT2G04910.1 | Unigene:At.66162 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | RefSeq:NP_178568.1 | ProteinID:OAP09774.1 | PFAM:PF07983 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | UniProt:Q9SI35 | SMART:SM00768 | UniParc:UPI000009F65D | InterPro:X8 |
Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SI35]
Coordinates
chr2:-:1723980..1724354
Molecular Weight (calculated)
13857.3 Da
IEP (calculated)
4.520
GRAVY (calculated)
-0.170
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYLIFVAKA EFGQWCVADG QIPDNVIQAA VDWACQTGGA DCSTIQPNQP CFLPNTVKDH ASVVFNNYYQ RYKRNGGSCN FNSTAFITQT DPSKQLYLNP
101: FCYSYLSSLI NQNLEPSVSD YLMI
101: FCYSYLSSLI NQNLEPSVSD YLMI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.