Factsheet for AT1G09460.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
plastid 2
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	78.79	88.14
CDY64750	Canola	endoplasmic reticulum, vacuole	79.39	87.04
CDX94970	Canola	plastid	77.27	86.15
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	76.67	82.41
CDY31085	Canola	plastid	76.06	71.51
CDY32184	Canola	vacuole	75.15	70.25
AT5G35740.1	Thale cress	extracellular	13.64	37.82
AT2G30933.1	Thale cress	extracellular	24.85	36.12
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	39.39	35.91
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	39.09	35.15
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	33.33	33.33
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	33.33	33.33
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	33.03	33.03
AT4G05430.3	Thale cress	extracellular, plasma membrane	16.67	32.74
AT1G18650.1	Thale cress	extracellular	17.58	31.52
AT5G61130.1	Thale cress	extracellular	18.79	30.85
KXG27714	Sorghum	vacuole	32.12	30.72
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.91	29.91
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	17.27	28.93
AT1G69295.1	Thale cress	extracellular	18.79	27.93
AT1G29380.1	Thale cress	extracellular	25.76	26.98
AT5G08000.2	Thale cress	extracellular	16.97	26.29
TraesCS4A01G358500.1	Wheat	extracellular	32.12	25.85
AT2G04910.1	Thale cress	extracellular	9.7	25.81
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	31.52	25.49
KRH68400	Soybean	extracellular	40.91	25.09
TraesCS5D01G513400.1	Wheat	extracellular	30.61	24.82
KRH33760	Soybean	vacuole	45.76	24.71
KRG90471	Soybean	vacuole	45.45	24.67
KRG96680	Soybean	extracellular	39.09	24.39
VIT_14s0060g00440.t01	Wine grape	vacuole	45.15	24.23
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	30.3	24.1
AT2G03505.1	Thale cress	extracellular	11.82	23.21
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	32.73	22.0
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	13.64	21.33
AT4G13600.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	14.85	21.21
Os03t0833600-01	Rice	plasma membrane	35.45	20.38
GSMUA_Achr2P02010_001	Banana	cytosol	27.58	19.4
EER90586	Sorghum	extracellular	34.85	18.7
Zm00001d012917_P001	Maize	plasma membrane	34.24	18.43
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	28.79	18.03
AT3G58100.2	Thale cress	cytosol	13.94	17.97
AT1G79480.1	Thale cress	extracellular	19.09	15.87
AT5G67460.1	Thale cress	vacuole	16.67	14.47

Protein Annotations

Gene3D:1.20.58.1040	MapMan:35.1	EntrezGene:837469	ProteinID:AEE28445.1	ArrayExpress:AT1G09460	EnsemblPlantsGene:AT1G09460
RefSeq:AT1G09460	TAIR:AT1G09460	RefSeq:AT1G09460-TAIR-G	EnsemblPlants:AT1G09460.1	TAIR:AT1G09460.1	ncoils:Coil
UniProt:F4I0Z2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	RefSeq:NP_172417.2	PFAM:PF07983	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR32227
PANTHER:PTHR32227:SF118	SMART:SM00768	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000162CE2	InterPro:X8
SEG:seg	:	:	:	:	:

Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]

Coordinates

chr1:+:3053698..3055360

Molecular Weight (calculated)

33993.0 Da

IEP (calculated)

6.696

GRAVY (calculated)

-0.042

Length

330 amino acids

Sequence
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.