Factsheet for Bra030780.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	85.02	88.47
CDY31085	Canola	plastid	97.72	85.47
CDY32184	Canola	vacuole	96.74	84.14
AT1G09460.1	Thale cress	extracellular, vacuole	82.41	76.67
Bra034233.1-P	Field mustard	cytosol	14.98	41.82
Bra035382.1-P	Field mustard	extracellular	14.33	36.97
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	39.74	33.7
Solyc01g101120.2.1	Tomato	endoplasmic reticulum, golgi	39.41	32.97
TraesCS4A01G178000.1	Wheat	extracellular, plasma membrane, vacuole	34.2	31.82
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	33.55	31.21
TraesCS4B01G138000.1	Wheat	extracellular, plasma membrane, vacuole	33.22	30.91
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	19.54	30.61
KXG27714	Sorghum	vacuole	33.55	29.86
Bra026879.1-P	Field mustard	extracellular	13.68	29.58
Bra010831.1-P	Field mustard	nucleus	27.69	29.51
Bra026878.1-P	Field mustard	extracellular	13.36	29.08
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	32.25	29.03
Bra004003.1-P	Field mustard	extracellular	20.52	28.9
Bra035941.1-P	Field mustard	extracellular	18.57	28.64
Bra003318.1-P	Field mustard	extracellular	15.31	27.65
Bra038314.1-P	Field mustard	mitochondrion	20.2	27.43
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.38	26.82
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	15.64	26.67
Bra026880.1-P	Field mustard	extracellular	15.31	26.26
Bra029334.1-P	Field mustard	extracellular	16.61	26.15
TraesCS4A01G358500.1	Wheat	extracellular	34.53	25.85
TraesCS5B01G513000.1	Wheat	extracellular, vacuole	34.2	25.74
TraesCS5D01G513400.1	Wheat	extracellular	33.22	25.06
Bra012981.1-P	Field mustard	extracellular, vacuole	17.92	24.77
Bra009313.1-P	Field mustard	extracellular	16.94	24.53
Bra019700.1-P	Field mustard	extracellular	15.64	24.37
Bra032314.1-P	Field mustard	plastid	29.97	24.27
Bra025116.1-P	Field mustard	extracellular	12.7	24.22
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	16.29	24.15
HORVU5Hr1G117440.1	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	32.25	23.86
Bra016724.1-P	Field mustard	extracellular	13.36	23.84
KRG90471	Soybean	vacuole	46.58	23.52
KRH68400	Soybean	extracellular	41.04	23.42
KRH33760	Soybean	vacuole	46.58	23.4
KRG96680	Soybean	extracellular	40.07	23.25
VIT_14s0060g00440.t01	Wine grape	vacuole	44.95	22.44
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	34.85	21.79
Os03t0833600-01	Rice	plasma membrane	37.13	19.86
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	33.88	19.73
GSMUA_Achr2P02010_001	Banana	cytosol	28.99	18.98
Zm00001d012917_P001	Maize	plasma membrane	37.13	18.6
EER90586	Sorghum	extracellular	36.48	18.21
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	18.24	17.34
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	20.52	16.11
Bra031835.1-P	Field mustard	vacuole	18.57	15.04

Protein Annotations

EnsemblPlants:Bra030780.1	EnsemblPlants:Bra030780.1-P	EnsemblPlantsGene:Bra030780	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI00025467C8	UniProt:M4EPQ9
MapMan:35.1	:	:	:	:	:

Description

AT1G09460 (E=1e-059) | glucan endo-1,3-beta-glucosidase-related

Coordinates

chrA08:-:20390090..20391162

Molecular Weight (calculated)

31345.7 Da

IEP (calculated)

7.066

GRAVY (calculated)

-0.127

Length

307 amino acids

Sequence
(BLAST)

001: MAKQSYFFLF LSLVPLCSST THDVINPPTV FPTNPTTTPP ATTFPPVTIT PTNPSPALPL NPPVTVVPPT LTPPVTTNPV TQYPPTQPSG TVPVIPPPVV
101: STSPSVSGQS WCVAKPGATQ TSLQLALDYA CGSGKADCSQ IQQGGNCYSP ISLQNHASFA FNSYYQKNPS PQSCDFGGAA SVVSTNPSTG SCVYQTGSSS
201: GSSTSIPGGT TTPTPSTQTV NQPPLTPTPI TPTGGVTIGV GTPPAVFNPA NPSSNTLPNP SSGGSAVYGF DGSPNGNNPT PSDSTNLKIH FGHTMVVTLI
301: LHAVLFH

Best Arabidopsis Sequence Match ( AT1G09460.1 )
(BLAST)

001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.