Factsheet for Bra035122.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	97.19	97.69
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	95.4	96.88
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	68.8	83.28
AT1G79480.1	Thale cress	extracellular	79.03	77.83
PGSC0003DMT400025000	Potato	nucleus	35.55	50.0
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	37.6	49.83
KRH43685	Soybean	plastid	29.92	47.18
GSMUA_Achr6P00220_001	Banana	nucleus	35.81	46.2
Zm00001d042912_P001	Maize	nucleus	20.97	46.07
KRH13771	Soybean	vacuole	40.41	44.01
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	39.9	42.39
HORVU2Hr1G099430.1	Barley	plastid	24.04	40.87
Bra035382.1-P	Field mustard	extracellular	12.02	39.5
EER90180	Sorghum	extracellular, plasma membrane	22.51	39.46
TraesCS7B01G384100.1	Wheat	extracellular	21.74	38.29
HORVU5Hr1G089770.2	Barley	plastid	18.67	37.82
TraesCS7D01G468800.1	Wheat	extracellular	21.23	37.39
Os06t0665200-00	Rice	cytosol	20.46	37.38
HORVU7Hr1G108980.1	Barley	extracellular	21.23	37.22
TraesCS7A01G481700.1	Wheat	extracellular	20.72	36.99
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	30.18	35.98
Bra034233.1-P	Field mustard	cytosol	9.97	35.45
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	28.9	31.65
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	28.39	31.18
TraesCS2A01G425000.1	Wheat	plastid	28.64	31.02
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	31.46	28.21
KXG27096	Sorghum	extracellular, vacuole	30.18	27.7
KXG36188	Sorghum	cytosol, endoplasmic reticulum, vacuole	38.36	27.68
TraesCS5B01G366600.1	Wheat	plastid	29.67	27.36
TraesCS5A01G365000.1	Wheat	extracellular	31.46	26.57
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	37.34	25.48
Os09t0560850-00	Rice	cytosol, endoplasmic reticulum, peroxisome	37.6	25.3
Bra026878.1-P	Field mustard	extracellular	8.95	24.82
Bra026879.1-P	Field mustard	extracellular	8.95	24.65
Bra016724.1-P	Field mustard	extracellular	10.49	23.84
Bra010831.1-P	Field mustard	nucleus	16.37	22.22
Bra031835.1-P	Field mustard	vacuole	21.23	21.9
Bra032719.1-P	Field mustard	endoplasmic reticulum, extracellular	11.51	21.74
Bra026880.1-P	Field mustard	extracellular	9.72	21.23
Bra025116.1-P	Field mustard	extracellular	8.7	21.12
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	10.49	20.92
Zm00001d026281_P003	Maize	plastid	29.16	20.8
Bra030780.1-P	Field mustard	endoplasmic reticulum, extracellular	16.11	20.52
Bra020023.1-P	Field mustard	endoplasmic reticulum, vacuole	15.35	20.34
Bra009313.1-P	Field mustard	extracellular	11.0	20.28
Bra035941.1-P	Field mustard	extracellular	10.23	20.1
Bra029334.1-P	Field mustard	extracellular	9.97	20.0
Bra019700.1-P	Field mustard	extracellular	9.72	19.29
Bra004003.1-P	Field mustard	extracellular	10.74	19.27
Bra003318.1-P	Field mustard	extracellular	8.18	18.82
Bra012981.1-P	Field mustard	extracellular, vacuole	10.23	18.02
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	8.18	17.78
Bra032314.1-P	Field mustard	plastid	17.14	17.68
Bra021679.1-P	Field mustard	extracellular, plasma membrane, vacuole	13.55	17.55
Bra038314.1-P	Field mustard	mitochondrion	9.72	16.81

Protein Annotations

EnsemblPlants:Bra035122.1	EnsemblPlants:Bra035122.1-P	EnsemblPlantsGene:Bra035122	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237
PFAM:PF07983	PRINTS:PR01217	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	TMHMM:TMhelix
UniParc:UPI0002541D59	UniProt:M4F225	MapMan:35.1	:	:	:

Description

AT1G79480 (E=2e-041) | LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 17 (TAIR:AT5G67460.1); Has 136128 Blast hits to 57102 proteins in 1817 species: Archae - 165; Bacteria - 17617; Metazoa - 56967; Fungi - 20796; Plants - 12784; Viruses - 3661; Other Eukaryotes - 24138 (source: NCBI BLink).

Coordinates

chrA07:-:22263448..22264841

Molecular Weight (calculated)

40843.5 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.584

Length

391 amino acids

Sequence
(BLAST)

001: MESSRALTTV CILLCLFFSA SFFTHSVDAR KLERHAKKKP KKLVIKAFKH TTFLEKMMTQ LNLAQPLEYS TTSSNTQPYG VSTTLTLPPY ASLPPLPVPG
101: NAPPFCINPP NTPLNSPPSI SNPGLSPPPG PITVPNPPES SSNPNSNPNP PDSTSNPNSN PNPNPPESSS NPNNPGSSSN PNPPVTVPSP PESSSNPNPP
201: ESSSNPNPPI TVPNPPESSS PNPPETVPSP PDESGHTPGP SGPISGPPNN EPGPTTPTDT PTPSGNLPSP TGSVPTPSTG FLPPIVYPPP MVPPPSGMTP
301: TSAYWCVAKP TVPDPIIQEA MNFACGSGAD CHSIQPNGPC FKPNTLWAHA SFAFNSYWQR TKSSGGSCTF GGTGMLVTVD PSYNGCHFDF F

Best Arabidopsis Sequence Match ( AT1G79480.1 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG
101: NAPPFCINPP NTPPSSSYPG LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS NPNPPDSSSN PNSNPNPPES
201: SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP
301: SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.