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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026878.1-P Field mustard extracellular 77.46 78.01
CDY16115 Canola extracellular 82.39 75.48
Bra026880.1-P Field mustard extracellular 75.35 59.78
Bra016724.1-P Field mustard extracellular 65.49 54.07
Bra025116.1-P Field mustard extracellular 58.45 51.55
PGSC0003DMT400045877 Potato extracellular 36.62 48.6
Bra019700.1-P Field mustard extracellular 65.49 47.21
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 64.08 43.13
KRG89485 Soybean extracellular 50.0 40.34
KRH50525 Soybean extracellular 50.7 39.34
VIT_01s0011g00570.t01 Wine grape extracellular 52.11 38.34
KRH70882 Soybean extracellular 52.82 34.56
GSMUA_Achr7P26650_001 Banana extracellular 28.17 34.48
KRH75030 Soybean extracellular 52.11 34.42
Bra029334.1-P Field mustard extracellular 45.77 33.33
GSMUA_Achr4P23440_001 Banana cytosol 34.51 32.67
Bra035941.1-P Field mustard extracellular 45.77 32.66
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 40.14 31.67
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 41.55 30.73
TraesCS5B01G398000.1 Wheat extracellular 35.21 30.49
TraesCS5B01G399400.1 Wheat extracellular 33.8 30.38
TraesCS5D01G403000.1 Wheat extracellular 35.21 30.12
TraesCS5A01G393200.1 Wheat extracellular 35.21 29.94
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.55 29.8
EER97492 Sorghum extracellular 40.14 29.38
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 39.44 29.32
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 38.73 29.26
GSMUA_Achr8P28170_001 Banana extracellular 31.69 29.03
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.85 29.0
Os07t0600700-01 Rice extracellular 39.44 28.87
Bra012981.1-P Field mustard extracellular, vacuole 45.07 28.83
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 40.14 28.64
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 40.14 28.64
Bra035382.1-P Field mustard extracellular 23.94 28.57
Os03t0756300-01 Rice extracellular 35.21 28.57
GSMUA_Achr9P07140_001 Banana extracellular 37.32 28.49
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.03 28.42
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.85 28.29
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 38.73 27.78
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.73 27.78
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 38.03 27.55
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.03 27.41
Bra009313.1-P Field mustard extracellular 40.85 27.36
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.32 27.04
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.94 26.98
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 37.32 26.9
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 35.21 26.6
OQU87600 Sorghum extracellular 35.21 26.6
Bra034233.1-P Field mustard cytosol 20.42 26.36
GSMUA_Achr5P08900_001 Banana extracellular 35.21 26.32
TraesCS3D01G299600.1 Wheat extracellular 35.92 26.02
TraesCS3A01G302400.1 Wheat extracellular 35.92 26.02
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.62 26.0
Os01t0763900-01 Rice extracellular 37.32 25.6
Bra004003.1-P Field mustard extracellular 38.73 25.23
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 36.62 24.64
TraesCS1A01G332500.1 Wheat extracellular 35.21 23.92
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 35.21 23.92
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 40.85 23.87
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.92 23.5
Bra038314.1-P Field mustard mitochondrion 37.32 23.45
Os05t0512600-01 Rice extracellular 36.62 22.81
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 33.1 22.71
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 35.92 22.57
Solyc04g005420.2.1 Tomato extracellular, vacuole 47.18 21.82
Zm00001d013250_P003 Maize extracellular 33.8 21.43
Zm00001d010728_P005 Maize extracellular 32.39 21.0
TraesCS5A01G548300.1 Wheat plasma membrane 28.17 20.41
HORVU2Hr1G033470.1 Barley cytosol, plastid 41.55 19.87
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 33.8 19.67
HORVU5Hr1G096090.6 Barley plastid 32.39 19.66
EES18492 Sorghum extracellular 31.69 19.65
KXG37528 Sorghum mitochondrion 35.92 19.25
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 36.62 18.91
Bra003318.1-P Field mustard extracellular 22.54 18.82
Zm00001d038682_P001 Maize extracellular 30.28 18.7
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 23.24 18.33
HORVU3Hr1G074010.3 Barley cytosol, plastid 36.62 17.87
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 29.58 13.68
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 28.17 13.56
Bra010831.1-P Field mustard nucleus 25.35 12.5
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 26.06 12.25
Bra032314.1-P Field mustard plastid 28.87 10.82
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 23.24 10.22
Bra031835.1-P Field mustard vacuole 23.94 8.97
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 24.65 8.95
Protein Annotations
EnsemblPlants:Bra026879.1EnsemblPlants:Bra026879.1-PEnsemblPlantsGene:Bra026879InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF147
PFAM:PF07983SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0002542E8CUniProt:M4EDL9
MapMan:35.1:::::
Description
AT1G13830 (E=1e-036) | beta-1,3-glucanase-related
Coordinates
chrA09:+:34085010..34085669
Molecular Weight (calculated)
14944.4 Da
IEP (calculated)
5.535
GRAVY (calculated)
-0.187
Length
142 amino acids
Sequence
(BLAST)
001: MRMFLALFLL LALTTSSNAT YCLCKDGTED NALQASIDYV CGKLDCNPIL DKGACYQPNT IKSHCDWAVN SYFQNVAQAP GSCDFSGTAT TSQNPSPYLV
101: TGCVYPSSAS SPGSLPSTTP PPGTKQTNGT VTPTNGASVY QH
Best Arabidopsis Sequence Match ( AT1G13830.2 )
(BLAST)
001: MQRNDLFNLS TTNRSQCSGF MVQSKAISFY LGAIYCLCKD GIGDTELQTS IDYACGTLAD CNPIHDKGTC YQPDTIKSHC DWAVNSYFQN AAQVPGSCNF
101: SGTATTNPNP PSNLANGCIY PSSPSSTRSP PSTTPPTGTT PTNGTTPFPG TPFPGTPFPG TPPVFGPTGV FNPSNPGSGA SSLGTSSVFT LCFSLLAFLW
201: GSDVRFGFSH V
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT1G13830]
SUBAcon: [vacuole,plastid,peroxisome,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.