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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G398000.1 Wheat extracellular 42.64 68.9
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 63.02 68.44
TraesCS5A01G393200.1 Wheat extracellular 42.26 67.07
TraesCS5D01G403000.1 Wheat extracellular 41.89 66.87
Zm00001d013250_P003 Maize extracellular 54.34 64.29
Os03t0756300-01 Rice extracellular 41.51 62.86
TraesCS5B01G399400.1 Wheat extracellular 37.36 62.66
KRH54678 Soybean extracellular, nucleus 23.02 54.95
HORVU4Hr1G028360.1 Barley peroxisome, plastid 25.66 53.97
HORVU5Hr1G096090.6 Barley plastid 40.75 46.15
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 30.94 45.56
PGSC0003DMT400045877 Potato extracellular 17.74 43.93
Bra026878.1-P Field mustard extracellular 22.26 41.84
AT1G18650.1 Thale cress extracellular 27.55 39.67
CDY26741 Canola extracellular 27.55 39.25
PGSC0003DMT400063348 Potato extracellular 26.79 38.38
CDY16115 Canola extracellular 22.26 38.06
CDX83826 Canola extracellular 26.04 37.5
Solyc03g115200.2.1 Tomato extracellular 26.42 37.43
OQU87600 Sorghum extracellular 26.42 37.23
CDY19232 Canola extracellular 26.42 37.23
CDX96707 Canola extracellular 25.66 36.76
Bra025116.1-P Field mustard extracellular 22.26 36.65
CDY51213 Canola extracellular 22.26 36.65
EER97492 Sorghum extracellular 26.42 36.08
KRH50525 Soybean extracellular 24.91 36.07
Bra026879.1-P Field mustard extracellular 19.25 35.92
KRG89485 Soybean extracellular 23.77 35.8
Bra035941.1-P Field mustard extracellular 26.79 35.68
CDY02987 Canola extracellular 21.51 35.4
CDY02169 Canola extracellular 25.66 35.05
KRH03122 Soybean extracellular, nucleus 26.79 34.98
Bra029334.1-P Field mustard extracellular 25.66 34.87
CDY42854 Canola extracellular 25.66 34.87
VIT_01s0011g00570.t01 Wine grape extracellular 25.28 34.72
CDY16822 Canola extracellular 26.04 34.67
CDX87201 Canola extracellular 26.04 34.67
VIT_17s0000g07260.t01 Wine grape extracellular 26.79 34.3
CDY23085 Canola extracellular, plasma membrane, vacuole 24.91 34.2
CDY65418 Canola cytosol 18.87 34.01
AT5G61130.1 Thale cress extracellular 25.66 33.83
CDY16114 Canola extracellular 22.64 33.52
KRH75030 Soybean extracellular 26.79 33.02
CDY33795 Canola extracellular 22.26 32.96
Bra026880.1-P Field mustard extracellular 22.26 32.96
AT2G03505.1 Thale cress extracellular 20.75 32.74
Solyc05g012380.2.1 Tomato extracellular 24.91 32.67
EES05109 Sorghum extracellular, plasma membrane 23.4 32.29
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 23.77 32.14
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 23.77 32.14
CDY65205 Canola plasma membrane 23.77 31.82
KRH70882 Soybean extracellular 26.04 31.8
PGSC0003DMT400072939 Potato extracellular 24.15 31.07
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 23.02 30.96
PGSC0003DMT400003054 Potato extracellular 22.26 30.89
CDY34558 Canola extracellular 20.0 30.81
Solyc01g010310.2.1 Tomato extracellular 21.89 30.69
Bra012981.1-P Field mustard extracellular, vacuole 25.66 30.63
CDX98134 Canola extracellular 21.89 30.37
Bra016724.1-P Field mustard extracellular 19.62 30.23
CDX96880 Canola extracellular 19.62 30.23
KRH56823 Soybean extracellular 24.15 30.05
CDX69983 Canola extracellular 23.77 29.72
Bra009313.1-P Field mustard extracellular 23.77 29.72
AT5G08000.2 Thale cress extracellular 23.77 29.58
CDY36415 Canola extracellular 21.51 29.08
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 21.51 28.93
Bra019700.1-P Field mustard extracellular 21.51 28.93
OQU76517 Sorghum extracellular 18.49 28.16
CDX99038 Canola extracellular 24.15 27.23
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 21.51 27.01
Bra004003.1-P Field mustard extracellular 21.13 25.69
CDY04273 Canola extracellular 21.13 25.69
CDY07353 Canola extracellular 21.13 25.69
CDY54140 Canola extracellular 19.25 24.4
OQU88437 Sorghum extracellular 15.85 23.86
CDY50312 Canola extracellular 19.25 23.72
EES18492 Sorghum extracellular 20.38 23.58
EES20007 Sorghum extracellular, vacuole 21.89 23.48
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 20.38 22.78
Solyc04g005420.2.1 Tomato extracellular, vacuole 26.04 22.48
Bra038314.1-P Field mustard mitochondrion 18.87 22.12
AT1G69295.1 Thale cress extracellular 18.49 22.07
EER90180 Sorghum extracellular, plasma membrane 15.85 18.83
EES01128 Sorghum extracellular 21.89 18.71
CDY47016 Canola extracellular 25.66 18.28
KXG27714 Sorghum vacuole 17.36 13.33
KXG27096 Sorghum extracellular, vacuole 15.09 9.39
EER90586 Sorghum extracellular 20.75 8.94
KXG36188 Sorghum cytosol, endoplasmic reticulum, vacuole 16.98 8.3
Protein Annotations
EnsemblPlants:KXG37528EnsemblPlantsGene:SORBI_3001G085200InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237PFAM:PF07983
ProteinID:KXG37528ProteinID:KXG37528.1SEG:segSMART:SM00768UniParc:UPI00081AE40DUniProt:A0A1B6QHX8
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr1:+:6574310..6577248
Molecular Weight (calculated)
27963.4 Da
IEP (calculated)
8.934
GRAVY (calculated)
-0.036
Length
265 amino acids
Sequence
(BLAST)
001: MESHTAFWRW RWTGRAAAAL ERSGLRLPAP LPVPMLRYTP LHRAGRLHLN QTPLVVASVQ ARKTHRERES CTRGAAGRTI EYLEPVHRCR RLTATASMAD
101: AARLFLLVAV TAALAGRSDA AWCVCRTDLA DTALQKTLDY ACGGGADCKP ILQNGACFAP DTVKAHCSYA VNSFYQRNNQ NPQACVFSGT ATLSNNDPSG
201: NGCTYPATPS AAATSSPGVY SPPTMGPSAL NDNSGAAGVL PTAAGLATRL VILACCSLVA LYLGA
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.