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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 86.17 86.17
TraesCS3A01G302400.1 Wheat extracellular 61.17 58.67
TraesCS3D01G299600.1 Wheat extracellular 60.11 57.65
Os01t0763900-01 Rice extracellular 63.3 57.49
KRH54678 Soybean extracellular, nucleus 33.51 56.76
GSMUA_Achr7P26650_001 Banana extracellular 28.72 46.55
GSMUA_Achr8P28170_001 Banana extracellular 34.57 41.94
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 61.17 41.82
EER97492 Sorghum extracellular 42.55 41.24
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 41.49 40.62
PGSC0003DMT400045877 Potato extracellular 22.34 39.25
HORVU3Hr1G074010.3 Barley cytosol, plastid 60.64 39.18
PGSC0003DMT400063348 Potato extracellular 38.3 38.92
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 39.36 38.74
GSMUA_Achr9P07140_001 Banana extracellular 37.77 38.17
Solyc03g115200.2.1 Tomato extracellular 37.77 37.97
GSMUA_Achr5P08900_001 Banana extracellular 37.77 37.37
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 38.83 37.06
CDY42854 Canola extracellular 37.77 36.41
KRH03122 Soybean extracellular, nucleus 38.83 35.96
Bra029334.1-P Field mustard extracellular 37.23 35.9
AT1G18650.1 Thale cress extracellular 35.11 35.87
Bra026879.1-P Field mustard extracellular 26.6 35.21
Bra035941.1-P Field mustard extracellular 37.23 35.18
CDY16822 Canola extracellular 37.23 35.18
CDY26741 Canola extracellular 34.57 34.95
CDY51213 Canola extracellular 29.79 34.78
CDX83826 Canola extracellular 34.04 34.78
CDY23085 Canola extracellular, plasma membrane, vacuole 35.64 34.72
CDX87201 Canola extracellular 36.7 34.67
CDX96707 Canola extracellular 34.04 34.59
AT5G61130.1 Thale cress extracellular 36.7 34.33
CDY16115 Canola extracellular 28.19 34.19
Bra025116.1-P Field mustard extracellular 29.26 34.16
Bra026878.1-P Field mustard extracellular 25.53 34.04
VIT_01s0011g00570.t01 Wine grape extracellular 34.57 33.68
CDY02987 Canola extracellular 28.72 33.54
CDY19232 Canola extracellular 33.51 33.51
CDY02169 Canola extracellular 34.57 33.51
EES18492 Sorghum extracellular 40.43 33.19
CDY33795 Canola extracellular 31.38 32.96
CDY16114 Canola extracellular 31.38 32.96
Bra026880.1-P Field mustard extracellular 31.38 32.96
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 42.55 32.92
VIT_17s0000g07260.t01 Wine grape extracellular 36.17 32.85
EES05109 Sorghum extracellular, plasma membrane 33.51 32.81
KRH50525 Soybean extracellular 31.38 32.24
Solyc05g012380.2.1 Tomato extracellular 34.57 32.18
KRG89485 Soybean extracellular 29.79 31.82
CDY65418 Canola cytosol 24.47 31.29
PGSC0003DMT400072939 Potato extracellular 34.04 31.07
KRH70882 Soybean extracellular 35.64 30.88
KRH75030 Soybean extracellular 35.11 30.7
KRH56823 Soybean extracellular 34.57 30.52
OQU76517 Sorghum extracellular 28.19 30.46
CDX98134 Canola extracellular 30.85 30.37
AT2G03505.1 Thale cress extracellular 27.13 30.36
Bra016724.1-P Field mustard extracellular 27.66 30.23
CDX96880 Canola extracellular 27.66 30.23
PGSC0003DMT400003054 Potato extracellular 30.32 29.84
Bra012981.1-P Field mustard extracellular, vacuole 34.57 29.28
Bra009313.1-P Field mustard extracellular 32.98 29.25
CDX69983 Canola extracellular 32.98 29.25
AT5G08000.2 Thale cress extracellular 32.98 29.11
CDY34558 Canola extracellular 26.6 29.07
CDY36415 Canola extracellular 29.79 28.57
OQU88437 Sorghum extracellular 26.6 28.41
Solyc01g010310.2.1 Tomato extracellular 28.19 28.04
Bra019700.1-P Field mustard extracellular 29.26 27.92
CDX99038 Canola extracellular 33.51 26.81
KXG37528 Sorghum mitochondrion 37.23 26.42
AT1G26450.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 27.13 25.89
CDY04273 Canola extracellular 29.79 25.69
Bra004003.1-P Field mustard extracellular 29.79 25.69
CDY07353 Canola extracellular 29.79 25.69
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 26.6 25.51
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 26.6 25.51
CDY54140 Canola extracellular 28.19 25.36
CDY65205 Canola plasma membrane 26.6 25.25
CDY50312 Canola extracellular 28.19 24.65
AT1G69295.1 Thale cress extracellular 28.72 24.32
EES20007 Sorghum extracellular, vacuole 30.85 23.48
AT1G13830.2 Thale cress mitochondrion, peroxisome, plastid, vacuole 26.06 23.22
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 28.19 22.36
Bra038314.1-P Field mustard mitochondrion 26.06 21.68
EER90180 Sorghum extracellular, plasma membrane 25.0 21.08
Solyc04g005420.2.1 Tomato extracellular, vacuole 30.32 18.57
CDY47016 Canola extracellular 36.7 18.55
EES01128 Sorghum extracellular 28.72 17.42
KXG27714 Sorghum vacuole 27.66 15.07
KXG27096 Sorghum extracellular, vacuole 23.94 10.56
EER90586 Sorghum extracellular 32.45 9.92
KXG36188 Sorghum cytosol, endoplasmic reticulum, vacuole 26.6 9.23
Protein Annotations
EnsemblPlants:OQU87600EnsemblPlantsGene:SORBI_3003G305601EntrezGene:8079240GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983ProteinID:OQU87600ProteinID:OQU87600.1
RefSeq:XP_002458540.1SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelixUniParc:UPI0001A84DE5
UniProt:A0A1W0VZN4MapMan:35.1::::
Description
hypothetical protein
Coordinates
chr3:-:63531775..63533494
Molecular Weight (calculated)
18753.9 Da
IEP (calculated)
6.204
GRAVY (calculated)
0.160
Length
188 amino acids
Sequence
(BLAST)
001: MELLVFVLLL LAVPLRGSDG AWCVCRPDVA DAALQKTLDY ACGHGADCAA VLPTGPCYSP TSVRAHCSYA ANSYFQRNSG QANGATCDFG GTANLTDTDP
101: SSGTCKYPAT PSEAGTSGNA TGTGTSSPGS ASNPATTPST GGSFTTPVGA FGPTPSTVSA GTTTTAAFFG RHALLVAVVS VALCFLVR
Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.