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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16822 Canola extracellular 97.99 97.99
CDX87201 Canola extracellular 97.49 97.49
Bra029334.1-P Field mustard extracellular 84.42 86.15
AT5G61130.1 Thale cress extracellular 80.4 79.6
Bra012981.1-P Field mustard extracellular, vacuole 83.92 75.23
Bra009313.1-P Field mustard extracellular 64.32 60.38
GSMUA_Achr4P23440_001 Banana cytosol 36.18 48.0
Bra026879.1-P Field mustard extracellular 32.66 45.77
GSMUA_Achr7P26650_001 Banana extracellular 26.63 45.69
GSMUA_Achr9P07140_001 Banana extracellular 41.71 44.62
TraesCS5B01G399400.1 Wheat extracellular 34.67 43.67
Bra026880.1-P Field mustard extracellular 39.2 43.58
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 39.2 43.33
Bra026878.1-P Field mustard extracellular 30.65 43.26
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 41.71 43.23
GSMUA_Achr5P08900_001 Banana extracellular 40.2 42.11
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 40.2 41.88
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 41.21 41.41
Bra016724.1-P Field mustard extracellular 35.68 41.28
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.7 40.5
TraesCS5B01G398000.1 Wheat extracellular 33.17 40.24
TraesCS5A01G393200.1 Wheat extracellular 33.67 40.12
Bra025116.1-P Field mustard extracellular 32.16 39.75
Os07t0600700-01 Rice extracellular 38.69 39.69
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.7 39.51
Os03t0756300-01 Rice extracellular 34.67 39.43
GSMUA_Achr8P28170_001 Banana extracellular 30.65 39.35
TraesCS5D01G403000.1 Wheat extracellular 32.66 39.16
Bra019700.1-P Field mustard extracellular 38.69 39.09
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 36.18 38.3
EER97492 Sorghum extracellular 36.68 37.63
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.62 37.3
OQU87600 Sorghum extracellular 35.18 37.23
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 37.19 37.19
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.19 37.19
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.18 36.84
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 34.67 36.7
TraesCS3A01G302400.1 Wheat extracellular 35.68 36.22
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.68 35.86
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 35.68 35.86
TraesCS3D01G299600.1 Wheat extracellular 35.18 35.71
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.67 35.03
Os01t0763900-01 Rice extracellular 36.18 34.78
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 41.21 33.74
Bra012458.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 33.17 33.67
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.66 33.16
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 32.66 32.99
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 32.66 32.5
Bra035382.1-P Field mustard extracellular 19.1 31.93
Bra034233.1-P Field mustard cytosol 17.09 30.91
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 32.66 30.81
Zm00001d010728_P005 Maize extracellular 33.67 30.59
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 31.66 30.14
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.66 29.95
Os05t0512600-01 Rice extracellular 34.17 29.82
Zm00001d013250_P003 Maize extracellular 33.17 29.46
TraesCS1A01G332500.1 Wheat extracellular 30.65 29.19
Bra004003.1-P Field mustard extracellular 31.66 28.9
Bra032719.1-P Field mustard endoplasmic reticulum, extracellular 29.65 28.5
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 32.16 28.32
Zm00001d038682_P001 Maize extracellular 32.66 28.26
EES18492 Sorghum extracellular 32.16 27.95
HORVU2Hr1G033470.1 Barley cytosol, plastid 41.21 27.61
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 33.67 27.46
KXG37528 Sorghum mitochondrion 35.68 26.79
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 36.18 26.18
HORVU5Hr1G096090.6 Barley plastid 30.65 26.07
TraesCS5A01G548300.1 Wheat plasma membrane 25.63 26.02
HORVU3Hr1G074010.3 Barley cytosol, plastid 36.18 24.74
Bra003318.1-P Field mustard extracellular 20.6 24.12
Bra038314.1-P Field mustard mitochondrion 26.63 23.45
Bra004688.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 21.11 23.33
Bra020023.1-P Field mustard endoplasmic reticulum, vacuole 28.14 18.98
Bra030780.1-P Field mustard endoplasmic reticulum, extracellular 28.64 18.57
Bra010831.1-P Field mustard nucleus 24.12 16.67
Bra021679.1-P Field mustard extracellular, plasma membrane, vacuole 24.62 16.23
Bra032314.1-P Field mustard plastid 27.14 14.25
Bra031835.1-P Field mustard vacuole 22.11 11.61
Bra008414.1-P Field mustard cytosol, nucleus, plastid, vacuole 18.09 11.15
Bra035122.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 20.1 10.23
Protein Annotations
EnsemblPlants:Bra035941.1EnsemblPlants:Bra035941.1-PEnsemblPlantsGene:Bra035941InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237
PFAM:PF07983SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0002542014UniProt:M4F4E1
MapMan:35.1:::::
Description
AT5G61130 (E=6e-053) PDCB1 | PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding
Coordinates
chrA09:-:2816681..2818272
Molecular Weight (calculated)
20330.7 Da
IEP (calculated)
7.635
GRAVY (calculated)
-0.105
Length
199 amino acids
Sequence
(BLAST)
001: MAVLVLSLLL LAMAGHSSAS WCVCKTGISD TVLQNTLDYA CGNGADCNPT HPKAPCFNPD NVRSHCSYAV NSFFQKKGQA PGTCDFSGTA TPTNTDPSYS
101: GCTFPTSASG SGGSTTMTPG TTNPKGSSTT TTLPGGNSPY SGTSTNGGFG NNSTGASGTG INPDYSIESG AFALKYSSKL STRLLLISLS GFCYFLMML
Best Arabidopsis Sequence Match ( AT5G61130.1 )
(BLAST)
001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L
Arabidopsis Description
PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.