Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54678 | Soybean | extracellular, nucleus | 26.02 | 45.95 |
| GSMUA_Achr7P26650_001 | Banana | extracellular | 21.43 | 36.21 |
| GSMUA_Achr8P28170_001 | Banana | extracellular | 27.04 | 34.19 |
| GSMUA_Achr9P07140_001 | Banana | extracellular | 31.12 | 32.8 |
| PGSC0003DMT400045877 | Potato | extracellular | 17.86 | 32.71 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 31.12 | 31.94 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 27.04 | 31.74 |
| PGSC0003DMT400063348 | Potato | extracellular | 29.59 | 31.35 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 31.12 | 31.12 |
| Solyc03g115200.2.1 | Tomato | extracellular | 29.08 | 30.48 |
| Bra026878.1-P | Field mustard | extracellular | 21.43 | 29.79 |
| GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 29.08 | 29.69 |
| GSMUA_Achr5P08900_001 | Banana | extracellular | 28.06 | 28.95 |
| AT1G18650.1 | Thale cress | extracellular | 27.04 | 28.8 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 28.06 | 28.5 |
| CDY16115 | Canola | extracellular | 22.45 | 28.39 |
| Bra026879.1-P | Field mustard | extracellular | 20.41 | 28.17 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.57 | 28.0 |
| CDX83826 | Canola | extracellular | 26.02 | 27.72 |
| CDY19232 | Canola | extracellular | 26.53 | 27.66 |
| KRH03122 | Soybean | extracellular, nucleus | 28.57 | 27.59 |
| CDX96707 | Canola | extracellular | 26.02 | 27.57 |
| CDY26741 | Canola | extracellular | 26.02 | 27.42 |
| KRG89485 | Soybean | extracellular | 23.98 | 26.7 |
| CDY23085 | Canola | extracellular, plasma membrane, vacuole | 26.02 | 26.42 |
| CDY02169 | Canola | extracellular | 26.02 | 26.29 |
| KRH50525 | Soybean | extracellular | 24.49 | 26.23 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 23.98 | 25.82 |
| AT5G08000.2 | Thale cress | extracellular | 28.06 | 25.82 |
| Bra026880.1-P | Field mustard | extracellular | 23.47 | 25.7 |
| CDY33795 | Canola | extracellular | 23.47 | 25.7 |
| PGSC0003DMT400003054 | Potato | extracellular | 25.0 | 25.65 |
| CDY42854 | Canola | extracellular | 25.51 | 25.64 |
| CDX87201 | Canola | extracellular | 26.02 | 25.63 |
| Bra035941.1-P | Field mustard | extracellular | 26.02 | 25.63 |
| CDY16822 | Canola | extracellular | 26.02 | 25.63 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 27.04 | 25.6 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 22.45 | 25.43 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.51 | 25.38 |
| PGSC0003DMT400072939 | Potato | extracellular | 26.53 | 25.24 |
| CDY16114 | Canola | extracellular | 22.96 | 25.14 |
| Bra029334.1-P | Field mustard | extracellular | 25.0 | 25.13 |
| CDY34558 | Canola | extracellular | 21.94 | 25.0 |
| Bra016724.1-P | Field mustard | extracellular | 21.94 | 25.0 |
| CDX96880 | Canola | extracellular | 21.94 | 25.0 |
| AT5G61130.1 | Thale cress | extracellular | 25.51 | 24.88 |
| CDY51213 | Canola | extracellular | 20.41 | 24.84 |
| CDY02987 | Canola | extracellular | 20.41 | 24.84 |
| Solyc05g012380.2.1 | Tomato | extracellular | 25.51 | 24.75 |
| GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 30.61 | 24.69 |
| Bra009313.1-P | Field mustard | extracellular | 26.53 | 24.53 |
| CDX69983 | Canola | extracellular | 26.53 | 24.53 |
| Solyc01g010310.2.1 | Tomato | extracellular | 23.47 | 24.34 |
| Bra025116.1-P | Field mustard | extracellular | 19.9 | 24.22 |
| KRH56823 | Soybean | extracellular | 26.02 | 23.94 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 25.51 | 23.92 |
| Bra012981.1-P | Field mustard | extracellular, vacuole | 27.04 | 23.87 |
| AT2G03505.1 | Thale cress | extracellular | 20.41 | 23.81 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 16.84 | 23.74 |
| CDY65418 | Canola | cytosol | 17.35 | 23.13 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.63 | 23.05 |
| KRH70882 | Soybean | extracellular | 25.51 | 23.04 |
| CDX99038 | Canola | extracellular | 27.55 | 22.98 |
| Bra019700.1-P | Field mustard | extracellular | 22.96 | 22.84 |
| KRH75030 | Soybean | extracellular | 25.0 | 22.79 |
| CDX98134 | Canola | extracellular | 21.94 | 22.51 |
| CDY36415 | Canola | extracellular | 22.45 | 22.45 |
| Bra012458.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 21.43 | 21.43 |
| CDY40247 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.43 | 21.43 |
| CDY65205 | Canola | plasma membrane | 21.43 | 21.21 |
| AT1G26450.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 20.41 | 20.3 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 18.37 | 20.22 |
| AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 21.43 | 19.91 |
| Bra004003.1-P | Field mustard | extracellular | 20.92 | 18.81 |
| CDY07353 | Canola | extracellular | 20.92 | 18.81 |
| CDY54140 | Canola | extracellular | 19.9 | 18.66 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 31.63 | 18.62 |
| AT1G69295.1 | Thale cress | extracellular | 20.92 | 18.47 |
| CDY04273 | Canola | extracellular | 20.41 | 18.35 |
| CDY50312 | Canola | extracellular | 19.9 | 18.14 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 19.9 | 17.81 |
| CDY40909 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.43 | 17.72 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 29.08 | 17.27 |
| Bra038314.1-P | Field mustard | mitochondrion | 17.86 | 15.49 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 31.12 | 14.88 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 22.45 | 14.33 |
| CDY47016 | Canola | extracellular | 26.53 | 13.98 |
| TraesCS2A01G425000.1 | Wheat | plastid | 24.49 | 13.3 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 23.98 | 10.15 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G548300.1 | EnsemblPlantsGene:TraesCS5A01G548300 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | PFAM:PF07983 |
| SEG:seg | SMART:SM00768 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:702459016..702460758
Molecular Weight (calculated)
20895.9 Da
IEP (calculated)
7.335
GRAVY (calculated)
-0.010
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MCKFLEPVLM HYIIDQRVYE QQKPRTDPSS MAATSALSIF LLLVVLAMST KGSSATGSSW CVCKSELPAA ALQRTLDYAC GHGGDCAPLL PGGQCHTDTD
101: TVATRCSYAA NSYYHNAKAK GNGHGGATCD FGGTATLTST DPSSGTCRYP ATTAPASSPA GAPWELWMFL LAIIAIFVSL CCCVEMHEQR RNTCRH
101: TVATRCSYAA NSYYHNAKAK GNGHGGATCD FGGTATLTST DPSSGTCRYP ATTAPASSPA GAPWELWMFL LAIIAIFVSL CCCVEMHEQR RNTCRH
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
101: TCPFPASARY TPFFLSSLLI CCFANKNWLW S
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.