Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 79.18 | 98.16 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 92.19 | 93.23 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 89.96 | 91.67 |
| EES20007 | Sorghum | extracellular, vacuole | 61.71 | 67.21 |
| Zm00001d009686_P002 | Maize | extracellular | 59.48 | 65.31 |
| Os05t0581900-01 | Rice | extracellular | 61.34 | 58.72 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 56.13 | 58.3 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 27.51 | 49.66 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 36.43 | 40.83 |
| PGSC0003DMT400044716 | Potato | extracellular | 35.69 | 39.34 |
| Solyc07g056310.2.1 | Tomato | extracellular | 36.06 | 39.27 |
| KRG98922 | Soybean | extracellular | 37.17 | 39.06 |
| KRH46050 | Soybean | extracellular | 36.06 | 37.89 |
| KRH14480 | Soybean | extracellular | 34.94 | 36.58 |
| KRH73630 | Soybean | extracellular | 34.94 | 36.43 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 26.39 | 36.41 |
| TraesCS3A01G302400.1 | Wheat | extracellular | 24.54 | 33.67 |
| TraesCS5A01G393200.1 | Wheat | extracellular | 20.82 | 33.53 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 17.1 | 33.09 |
| AT2G30933.1 | Thale cress | extracellular | 27.88 | 33.04 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 29.0 | 32.77 |
| CDY29629 | Canola | extracellular | 27.88 | 32.75 |
| CDX97778 | Canola | extracellular | 27.88 | 32.75 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 40.15 | 32.43 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 29.74 | 32.39 |
| KRH42964 | Soybean | extracellular | 32.71 | 31.88 |
| KRH59084 | Soybean | extracellular | 29.74 | 31.87 |
| TraesCS5A01G456400.1 | Wheat | extracellular, plasma membrane | 21.56 | 31.87 |
| TraesCS5A01G548300.1 | Wheat | plasma membrane | 23.05 | 31.63 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 19.7 | 30.64 |
| TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 21.93 | 29.95 |
| Solyc02g071200.2.1 | Tomato | extracellular | 31.97 | 28.38 |
| Bra010831.1-P | Field mustard | nucleus | 30.11 | 28.12 |
| TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 20.82 | 28.0 |
| CDY43335 | Canola | extracellular | 30.48 | 27.8 |
| TraesCS1A01G332500.1 | Wheat | extracellular | 21.56 | 27.75 |
| KRH37784 | Soybean | extracellular | 33.09 | 27.3 |
| KRH12824 | Soybean | extracellular, vacuole | 32.34 | 26.85 |
| CDX99818 | Canola | extracellular | 29.0 | 26.44 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 29.37 | 26.16 |
| CDX90189 | Canola | extracellular | 30.11 | 25.8 |
| CDY48334 | Canola | vacuole | 30.11 | 25.8 |
| AT1G29380.1 | Thale cress | extracellular | 30.11 | 25.71 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 16.73 | 25.28 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 20.45 | 25.11 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 28.62 | 23.33 |
| Bra032314.1-P | Field mustard | plastid | 30.48 | 21.64 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 28.25 | 18.54 |
| TraesCS2A01G425000.1 | Wheat | plastid | 20.82 | 15.51 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 21.19 | 12.31 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G420600.1 | EnsemblPlantsGene:TraesCS1A01G420600 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1A:-:577079364..577080568
Molecular Weight (calculated)
27067.9 Da
IEP (calculated)
6.480
GRAVY (calculated)
0.025
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIGPVHHCL ASLLVLLPLL CCHAVRGVEQ RAHTGAASRP QAATVRLERA RDMPELDVTT PLATVPLANP TPMPEATAAP TLAHPTAAAG AGSWCVASPS
101: AGAAALQVAL DYACGQGADC SPIQPGGSCA DPDTVRDHAS YAFNSYYQKN PVQTSCDFAG AAILTSTDPS TTSCKYPSTS TGASVLNTTS PVTPVNPTYG
201: SPPGGSYNSP PGPGGYYNSP PIYGSMSPPD YGGSISAATA VMPGSKSTTA ATSLTCLLVV ATVSLNLCK
101: AGAAALQVAL DYACGQGADC SPIQPGGSCA DPDTVRDHAS YAFNSYYQKN PVQTSCDFAG AAILTSTDPS TTSCKYPSTS TGASVLNTTS PVTPVNPTYG
201: SPPGGSYNSP PGPGGYYNSP PIYGSMSPPD YGGSISAATA VMPGSKSTTA ATSLTCLLVV ATVSLNLCK
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.