Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 77.44 | 94.93 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 93.23 | 92.19 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 87.59 | 88.26 |
| EES20007 | Sorghum | extracellular, vacuole | 61.65 | 66.4 |
| Zm00001d009686_P002 | Maize | extracellular | 59.4 | 64.49 |
| Os05t0581900-01 | Rice | extracellular | 61.28 | 58.01 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 55.26 | 56.76 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 27.82 | 49.66 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 36.84 | 40.83 |
| PGSC0003DMT400044716 | Potato | extracellular | 35.71 | 38.93 |
| Solyc07g056310.2.1 | Tomato | extracellular | 36.09 | 38.87 |
| KRG98922 | Soybean | extracellular | 36.84 | 38.28 |
| KRH46050 | Soybean | extracellular | 35.71 | 37.11 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 26.69 | 36.41 |
| KRH14480 | Soybean | extracellular | 34.96 | 36.19 |
| KRH73630 | Soybean | extracellular | 34.96 | 36.05 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 18.42 | 35.77 |
| AT2G30933.1 | Thale cress | extracellular | 28.2 | 33.04 |
| TraesCS5B01G398000.1 | Wheat | extracellular | 20.3 | 32.93 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 29.32 | 32.77 |
| CDY29629 | Canola | extracellular | 28.2 | 32.75 |
| CDX97778 | Canola | extracellular | 28.2 | 32.75 |
| TraesCS5B01G399400.1 | Wheat | extracellular | 19.17 | 32.28 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 29.32 | 31.58 |
| KRH42964 | Soybean | extracellular | 32.71 | 31.52 |
| TraesCS5B01G465400.1 | Wheat | extracellular, plasma membrane | 21.43 | 31.32 |
| KRH59084 | Soybean | extracellular | 29.32 | 31.08 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 39.47 | 30.79 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 19.92 | 30.64 |
| TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 21.05 | 28.28 |
| TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 22.18 | 28.23 |
| CDY43335 | Canola | extracellular | 31.2 | 28.14 |
| Bra010831.1-P | Field mustard | nucleus | 30.08 | 27.78 |
| Solyc02g071200.2.1 | Tomato | extracellular | 30.83 | 27.06 |
| KRH37784 | Soybean | extracellular | 33.08 | 26.99 |
| TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 20.68 | 26.83 |
| CDX99818 | Canola | extracellular | 29.7 | 26.78 |
| KRH12824 | Soybean | extracellular, vacuole | 32.33 | 26.54 |
| AT1G29380.1 | Thale cress | extracellular | 31.2 | 26.35 |
| CDY48334 | Canola | vacuole | 30.83 | 26.11 |
| CDX90189 | Canola | extracellular | 30.83 | 26.11 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 17.29 | 25.84 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 21.43 | 25.68 |
| Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 28.57 | 25.17 |
| TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 24.06 | 23.27 |
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 28.57 | 23.03 |
| Bra032314.1-P | Field mustard | plastid | 31.2 | 21.9 |
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 27.82 | 18.14 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 22.18 | 16.53 |
| TraesCS5B01G366600.1 | Wheat | plastid | 21.05 | 13.21 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G451800.1 | EnsemblPlantsGene:TraesCS1B01G451800 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1B:-:668982087..668983260
Molecular Weight (calculated)
27095.9 Da
IEP (calculated)
6.599
GRAVY (calculated)
-0.087
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHGPVHHCL ASLLVLLPLY YCHARGVEQR ALGDASRPRS VVRLERARDM PELDVTTPLA TVPLANPTPM PEATAAPTLA HPTAAAGAGS WCVASPSAGA
101: GALQVALDYA CGQGADCSPI QPGGSCADPD TVRDHASYAF NSYYQKNPVQ TSCDFAGAAI LTSTDPSTTS CKYPSTSTGA SVLNTTSPVT PVNPTYGSPP
201: GGSYNSPPGP GGYYNSPPIY GSMSPPDYGG SISAATAMMP GSKCTTAVTT SLTCLLVTTM SLGLHK
101: GALQVALDYA CGQGADCSPI QPGGSCADPD TVRDHASYAF NSYYQKNPVQ TSCDFAGAAI LTSTDPSTTS CKYPSTSTGA SVLNTTSPVT PVNPTYGSPP
201: GGSYNSPPGP GGYYNSPPIY GSMSPPDYGG SISAATAMMP GSKCTTAVTT SLTCLLVTTM SLGLHK
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.