Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044716 | Potato | extracellular | 93.12 | 94.26 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 35.22 | 58.39 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 55.87 | 57.5 |
| KRH14480 | Soybean | extracellular | 55.06 | 52.92 |
| KRH73630 | Soybean | extracellular | 54.66 | 52.33 |
| KRG98922 | Soybean | extracellular | 50.61 | 48.83 |
| KRH46050 | Soybean | extracellular | 49.39 | 47.66 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 38.06 | 43.32 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 40.08 | 41.6 |
| Solyc07g047710.2.1 | Tomato | extracellular | 18.62 | 40.35 |
| EES20007 | Sorghum | extracellular, vacuole | 38.06 | 38.06 |
| Zm00001d009686_P002 | Maize | extracellular | 36.84 | 37.14 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 39.68 | 37.12 |
| Solyc11g012580.1.1 | Tomato | extracellular | 17.41 | 36.75 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 38.87 | 36.09 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.27 | 36.06 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 36.44 | 34.75 |
| Solyc04g058080.2.1 | Tomato | extracellular | 24.7 | 34.27 |
| Os05t0581900-01 | Rice | extracellular | 38.06 | 33.45 |
| Os01t0631500-01 | Rice | extracellular | 36.44 | 32.26 |
| Solyc03g115200.2.1 | Tomato | extracellular | 24.29 | 32.09 |
| Solyc02g071200.2.1 | Tomato | extracellular | 39.27 | 32.01 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 23.89 | 29.95 |
| Zm00001d011431_P001 | Maize | plasma membrane | 36.03 | 28.8 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 23.08 | 28.79 |
| EES01128 | Sorghum | extracellular | 35.22 | 28.06 |
| Solyc01g010310.2.1 | Tomato | extracellular | 20.65 | 26.98 |
| Solyc05g012380.2.1 | Tomato | extracellular | 21.86 | 26.73 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 36.03 | 26.73 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 36.44 | 26.39 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 35.63 | 24.79 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 36.03 | 24.25 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 24.29 | 23.26 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 19.43 | 21.33 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 20.65 | 17.29 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 19.84 | 15.96 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4CGG4 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g056310.2 | EnsemblPlants:Solyc07g056310.2.1 | UniParc:UPI000276B068 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr7:+:64156593..64158916
Molecular Weight (calculated)
25776.0 Da
IEP (calculated)
7.391
GRAVY (calculated)
-0.023
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRILRSFY IFIQICCLLI CSGSNATHTG HNSKSISSNQ KDITTPITTV PTGTPLTTTP TITTPVLNPT ISDPDSTSNG PSNPVLTPSV TNSPTYSSGS
101: SSWCVASQAA SQTTLQVALD YACGYGGADC SAIQTGGTCY NPNTLRAHAS FAFNSYYQKN PIPNSCNFAG AAVTTNTDPS TGSCQYPSTS TSASILNTTN
201: SSGSTVFGAG PITPTTSAAV SPNIILNYYH HIFIHLVILL ADCHNIL
101: SSWCVASQAA SQTTLQVALD YACGYGGADC SAIQTGGTCY NPNTLRAHAS FAFNSYYQKN PIPNSCNFAG AAVTTNTDPS TGSCQYPSTS TSASILNTTN
201: SSGSTVFGAG PITPTTSAAV SPNIILNYYH HIFIHLVILL ADCHNIL
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.