Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059279 | Potato | cytosol | 60.67 | 90.76 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 46.07 | 61.65 |
| KRH59215 | Soybean | extracellular | 60.67 | 59.67 |
| Bra034233.1-P | Field mustard | cytosol | 36.52 | 59.09 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 45.51 | 56.64 |
| CDY56715 | Canola | cytosol | 35.96 | 56.64 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 62.36 | 53.62 |
| CDY21992 | Canola | cytosol | 42.7 | 53.52 |
| CDY48582 | Canola | cytosol | 42.7 | 53.52 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 49.44 | 50.87 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 49.44 | 50.87 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 49.44 | 50.87 |
| OQU88437 | Sorghum | extracellular | 47.75 | 48.3 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 44.94 | 47.62 |
| Zm00001d007864_P001 | Maize | extracellular | 46.07 | 46.33 |
| Solyc11g012580.1.1 | Tomato | extracellular | 25.28 | 38.46 |
| Solyc07g047710.2.1 | Tomato | extracellular | 24.16 | 37.72 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 29.21 | 26.4 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 28.65 | 25.76 |
| Solyc01g010310.2.1 | Tomato | extracellular | 26.4 | 24.87 |
| Solyc07g056310.2.1 | Tomato | extracellular | 34.27 | 24.7 |
| Solyc03g115200.2.1 | Tomato | extracellular | 25.84 | 24.6 |
| Solyc05g012380.2.1 | Tomato | extracellular | 27.53 | 24.26 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 28.65 | 22.67 |
| Solyc02g071200.2.1 | Tomato | extracellular | 33.15 | 19.47 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 26.4 | 18.22 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 30.9 | 14.99 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 23.03 | 13.9 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 23.03 | 13.36 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4BT01 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc04g058080.2 | EnsemblPlants:Solyc04g058080.2.1 | UniParc:UPI000276603A | InterPro:X8 | : |
Description
No Description!
Coordinates
chr4:-:55197122..55199475
Molecular Weight (calculated)
19625.7 Da
IEP (calculated)
6.482
GRAVY (calculated)
0.091
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKDWIFLS FLIVKCFFVV KVEGMVQEKE DATIPITTLS PPEGNTTFLG GTTWCVARAG ARQFDLQNAL DWACGLGMAD CRPIQAGGPC FEPNTLLSHA
101: SFAFNTYYQQ NGNSDIACNF GGTAILTKTN PSHEKCIYVT SSPRVENMKS EAPPFTKERL SIVWWKIAII LLLLYSGS
101: SFAFNTYYQQ NGNSDIACNF GGTAILTKTN PSHEKCIYVT SSPRVENMKS EAPPFTKERL SIVWWKIAII LLLLYSGS
001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.