Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g02720.t01 | Wine grape | plastid | 34.65 | 53.85 |
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 25.74 | 52.35 |
| KRH42964 | Soybean | extracellular | 42.24 | 46.38 |
| KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 36.3 | 44.53 |
| Solyc07g047710.2.1 | Tomato | extracellular | 16.17 | 42.98 |
| KRH12824 | Soybean | extracellular, vacuole | 44.88 | 41.98 |
| KRH37784 | Soybean | extracellular | 44.88 | 41.72 |
| KRH59084 | Soybean | extracellular | 34.32 | 41.43 |
| CDY43335 | Canola | extracellular | 38.94 | 40.0 |
| Solyc07g056310.2.1 | Tomato | extracellular | 32.01 | 39.27 |
| CDX99818 | Canola | extracellular | 37.95 | 38.98 |
| CDY48334 | Canola | vacuole | 39.6 | 38.22 |
| Bra010831.1-P | Field mustard | nucleus | 36.3 | 38.19 |
| CDX90189 | Canola | extracellular | 39.27 | 37.9 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 26.4 | 36.87 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 27.72 | 35.29 |
| AT1G29380.1 | Thale cress | extracellular | 35.64 | 34.29 |
| Solyc11g012580.1.1 | Tomato | extracellular | 13.2 | 34.19 |
| Os01t0631500-01 | Rice | extracellular | 31.02 | 33.69 |
| Solyc05g012380.2.1 | Tomato | extracellular | 22.11 | 33.17 |
| Solyc04g058080.2.1 | Tomato | extracellular | 19.47 | 33.15 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 21.45 | 32.99 |
| EES20007 | Sorghum | extracellular, vacuole | 26.73 | 32.79 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 28.38 | 31.97 |
| Bra032314.1-P | Field mustard | plastid | 39.93 | 31.93 |
| Zm00001d009686_P002 | Maize | extracellular | 25.74 | 31.84 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 20.79 | 31.82 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 27.72 | 31.82 |
| Solyc03g115200.2.1 | Tomato | extracellular | 19.47 | 31.55 |
| EES01128 | Sorghum | extracellular | 32.01 | 31.29 |
| Zm00001d011431_P001 | Maize | plasma membrane | 31.68 | 31.07 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 27.06 | 30.83 |
| Os05t0581900-01 | Rice | extracellular | 28.38 | 30.61 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 25.41 | 29.73 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 31.68 | 28.83 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 31.68 | 28.15 |
| Solyc01g010310.2.1 | Tomato | extracellular | 17.16 | 27.51 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 32.01 | 27.32 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 21.12 | 24.81 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 29.37 | 24.25 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 17.82 | 24.0 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 20.13 | 20.68 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 18.48 | 18.24 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4B896 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g071200.2 | EnsemblPlants:Solyc02g071200.2.1 | UniParc:UPI0002768C00 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr2:+:40683411..40685471
Molecular Weight (calculated)
31647.4 Da
IEP (calculated)
4.296
GRAVY (calculated)
-0.539
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MRISCCFLFC LLIFSGTSIA DKHPTKAIRK SKKLAFQEED IAISPSMYSD QLDVPIINPT TPGTTYPDPT MDSPPPPSTT QPITNPAPYM NPNPNPNPNP
101: NPNPNPNPNP NPNPNPNPNP SNNPGPSTGG AWCVASSTAS TTALQVALDY ACGFGGADCS TIQSGGSCYE PNTIKDHASY AFNDYYQKNP APTSCDFGGT
201: AQLTYTDPSS GNCHYAASKS TPTTPPAQPP PTLPPPSLPP PTPSTTTPVN PYTPGGPNGF GSDPTDYGAE PTGTPSGADN LSSNFQFLFA MASFLVAVTA
301: IQF
101: NPNPNPNPNP NPNPNPNPNP SNNPGPSTGG AWCVASSTAS TTALQVALDY ACGFGGADCS TIQSGGSCYE PNTIKDHASY AFNDYYQKNP APTSCDFGGT
201: AQLTYTDPSS GNCHYAASKS TPTTPPAQPP PTLPPPSLPP PTPSTTTPVN PYTPGGPNGF GSDPTDYGAE PTGTPSGADN LSSNFQFLFA MASFLVAVTA
301: IQF
001: MTHRIAPRCF STIMLLCLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP SLTFPGPTTP TGGYPPLDGT TPTGGYPPLY GTTPPGGGDV
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
101: GGGGGGYGGG TPGGGGGGGG DTGAGAGGGG YGGGGDTGAG GGVGSGQWCI AKANASPTSL QVALDYACGY GGADCGQIQQ GAACYEPNTI RDHASFAFNS
201: YYQKHPGSDS CNFGGAAQLT STDPSKGSCH FSSSSGTVRY VFLFPQINFL TCQKSEKNNC D
Arabidopsis Description
Beta-1,3 glucanase [Source:UniProtKB/TrEMBL;Acc:Q6DST9]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.