Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015724 | Potato | extracellular | 95.61 | 95.61 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 64.04 | 62.39 |
| CDY47296 | Canola | extracellular | 60.53 | 57.98 |
| AT5G35740.1 | Thale cress | extracellular | 59.65 | 57.14 |
| CDX74636 | Canola | extracellular | 59.65 | 57.14 |
| Bra035382.1-P | Field mustard | extracellular | 59.65 | 57.14 |
| KRH14105 | Soybean | extracellular | 57.89 | 55.93 |
| KRH74013 | Soybean | extracellular | 56.14 | 54.24 |
| GSMUA_Achr11P... | Banana | extracellular | 55.26 | 52.94 |
| Solyc11g012580.1.1 | Tomato | extracellular | 52.63 | 51.28 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 53.51 | 50.41 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 54.39 | 45.26 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 54.39 | 44.6 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 52.63 | 43.17 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 49.12 | 42.11 |
| AT2G04910.1 | Thale cress | extracellular | 45.61 | 41.94 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 42.98 | 39.52 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 42.98 | 39.2 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 41.23 | 38.84 |
| Solyc04g058080.2.1 | Tomato | extracellular | 37.72 | 24.16 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 35.96 | 20.81 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 35.96 | 20.71 |
| Solyc03g115200.2.1 | Tomato | extracellular | 33.33 | 20.32 |
| Solyc05g012380.2.1 | Tomato | extracellular | 35.09 | 19.8 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.72 | 19.11 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 42.98 | 18.99 |
| Solyc07g056310.2.1 | Tomato | extracellular | 40.35 | 18.62 |
| Solyc01g010310.2.1 | Tomato | extracellular | 30.7 | 18.52 |
| Solyc02g071200.2.1 | Tomato | extracellular | 42.98 | 16.17 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 35.96 | 13.9 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 42.98 | 13.35 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 32.46 | 12.05 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4CEX7 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc07g047710.2 | EnsemblPlants:Solyc07g047710.2.1 | UniParc:UPI000276AC26 | InterPro:X8 | : |
Description
No Description!
Coordinates
chr7:-:58931403..58932662
Molecular Weight (calculated)
13016.4 Da
IEP (calculated)
5.568
GRAVY (calculated)
-0.321
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSFLVLLL FMFVTKISVN GQLEEWCIAD EQTPDTELQV ALDWACGKGG ADCSKIQKDQ SCYYPNTVRD HASYAFNNYF QKYKRKGGTC FFNNAAMVIQ
101: VDPSHNSCHY EYMP
101: VDPSHNSCHY EYMP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.