Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035382.1-P | Field mustard | extracellular | 70.09 | 68.91 |
| CDX74636 | Canola | extracellular | 70.09 | 68.91 |
| KRH14105 | Soybean | extracellular | 69.23 | 68.64 |
| AT5G35740.1 | Thale cress | extracellular | 69.23 | 68.07 |
| CDY47296 | Canola | extracellular | 68.38 | 67.23 |
| KRH74013 | Soybean | extracellular | 67.52 | 66.95 |
| Solyc07g047710.2.1 | Tomato | extracellular | 62.39 | 64.04 |
| PGSC0003DMT400015724 | Potato | extracellular | 62.39 | 64.04 |
| GSMUA_Achr11P... | Banana | extracellular | 59.83 | 58.82 |
| GSMUA_Achr9P09230_001 | Banana | extracellular | 55.56 | 53.72 |
| TraesCS5B01G395600.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 56.41 | 48.18 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 56.41 | 47.48 |
| AT2G04910.1 | Thale cress | extracellular | 48.72 | 45.97 |
| TraesCS5A01G390800.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 53.85 | 45.32 |
| HORVU5Hr1G095450.3 | Barley | extracellular | 51.28 | 45.11 |
| CDY05067 | Canola | endoplasmic reticulum, extracellular | 42.73 | 40.32 |
| CDX90730 | Canola | endoplasmic reticulum, extracellular | 42.73 | 40.0 |
| CDY72034 | Canola | endoplasmic reticulum, extracellular | 39.32 | 38.02 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 39.32 | 23.59 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 34.19 | 22.99 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 38.46 | 21.74 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 34.19 | 20.73 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 38.46 | 20.45 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 41.88 | 20.42 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 35.9 | 20.29 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 40.17 | 18.58 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 39.32 | 12.5 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 41.88 | 11.86 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 42.73 | 8.13 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 13.68 | 4.34 |
Protein Annotations
| EntrezGene:104880924 | MapMan:35.1 | ProteinID:CBI28425 | ProteinID:CBI28425.3 | UniProt:D7TD52 | EMBL:FN595759 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 | SignalP:SignalP-noTM | TIGR:TC62188 |
| UniParc:UPI0001BE2FC8 | ArrayExpress:VIT_12s0057g00700 | EnsemblPlantsGene:VIT_12s0057g00700 | EnsemblPlants:VIT_12s0057g00700.t01 | InterPro:X8 | RefSeq:XP_010657449.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:9326859..9328361
Molecular Weight (calculated)
12945.2 Da
IEP (calculated)
4.440
GRAVY (calculated)
-0.262
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MPISLLRIVL GLLLLVSTGT KSAGEFEQWC IADEQTPDDE LQAGIDWACG EGGADCSKIQ VNKPCYLPNT VRDHASYAFN NYYQKFKNKG GTCYFNGAAM
101: ITELDPSHDS CHYDFIP
101: ITELDPSHDS CHYDFIP
001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP
101: AMITELDPSH GSCQYEYNP
Arabidopsis Description
At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.