Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042912_P001 | Maize | nucleus | 30.83 | 43.82 |
| HORVU5Hr1G089770.2 | Barley | plastid | 32.02 | 41.97 |
| Os06t0665200-00 | Rice | cytosol | 34.39 | 40.65 |
| KRG90034 | Soybean | extracellular, plasma membrane | 47.43 | 40.54 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 18.58 | 40.17 |
| HORVU2Hr1G099430.1 | Barley | plastid | 35.97 | 39.57 |
| EER90180 | Sorghum | extracellular, plasma membrane | 34.78 | 39.46 |
| GSMUA_Achr6P00220_001 | Banana | nucleus | 46.64 | 38.94 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 33.6 | 38.29 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 33.6 | 38.12 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 32.81 | 37.9 |
| TraesCS7D01G468800.1 | Wheat | extracellular | 33.2 | 37.84 |
| Solyc05g016390.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.55 | 36.82 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 52.17 | 35.87 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 39.92 | 30.79 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 41.9 | 29.69 |
| TraesCS2A01G425000.1 | Wheat | plastid | 41.9 | 29.36 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 41.11 | 29.21 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 20.16 | 26.15 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 20.95 | 25.6 |
| KXG27096 | Sorghum | extracellular, vacuole | 41.9 | 24.88 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 21.34 | 24.55 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 22.92 | 24.17 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 19.76 | 24.15 |
| TraesCS5B01G366600.1 | Wheat | plastid | 39.53 | 23.58 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 17.79 | 23.32 |
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 39.92 | 23.17 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 15.02 | 21.84 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 39.92 | 21.81 |
| KXG36188 | Sorghum | cytosol, endoplasmic reticulum, vacuole | 44.66 | 20.85 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 33.2 | 20.34 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 43.08 | 19.02 |
| Zm00001d026281_P003 | Maize | plastid | 41.11 | 18.98 |
| Os09t0560850-00 | Rice | cytosol, endoplasmic reticulum, peroxisome | 42.69 | 18.59 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 30.04 | 12.36 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 13.04 | 8.94 |
Protein Annotations
| EntrezGene:100241626 | wikigene:100241626 | MapMan:35.1 | EMBL:AM441117 | ProteinID:CAN78496 | ProteinID:CAN78496.1 |
| ProteinID:CBI34142 | ProteinID:CBI34142.3 | UniProt:D7TUG7 | EMBL:FN596248 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | PFAM:PF07983 | PRINTS:PR01217 |
| PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | SMART:SM00768 | SignalP:SignalP-noTM | TIGR:TC57116 | UniParc:UPI0001BE41BA |
| ArrayExpress:VIT_03s0017g02240 | EnsemblPlantsGene:VIT_03s0017g02240 | EnsemblPlants:VIT_03s0017g02240.t01 | EntrezGene:VPRP1 | wikigene:VPRP1 | unigene:Vvi.15297 |
| InterPro:X8 | RefSeq:XP_002264622 | RefSeq:XP_002264622.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:+:19009110..19010994
Molecular Weight (calculated)
27213.4 Da
IEP (calculated)
4.794
GRAVY (calculated)
-0.149
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNIVVFIFI SVTTLIISTP CDARSSAQML EVEGEEFGES SVTGGRKMQQ VAVNLENTDS YISSPFSLPP FDSLSPLPSP ETAPPFCVCP PFSPQPPSIP
101: TTPPIFQGPP THSPVPNPPE YELPSPPKHA PSSPKRAPSP PVFKPPVVLP PPSTPPPLHK APQYAVWCVA KPTVPDPIIQ EAMDYACGKG ADCEAIKPDG
201: LCFQPNTLFA HASYAFNSYW QRTKVAGGTC DFGGTAMLVT VNPSFDECHF VYN
101: TTPPIFQGPP THSPVPNPPE YELPSPPKHA PSSPKRAPSP PVFKPPVVLP PPSTPPPLHK APQYAVWCVA KPTVPDPIIQ EAMDYACGKG ADCEAIKPDG
201: LCFQPNTLFA HASYAFNSYW QRTKVAGGTC DFGGTAMLVT VNPSFDECHF VYN
001: MESYRVFTTI CLLLCLFLSA NFFTHYVDAR KSVGFEREPK KVMMIKALKH TSLLQKMMTQ LNLAQPLDYS SSSNTQPYGV STTLTLPPYV SLPPLSVPGN
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
101: APPFCINPPN TPPSSSYPGL SPPPGPITLP NPPDSSSNPN SNPNPPESSS NPNPPDSSSN PNSNPNPPVT VPNPPESSSN PNPPDSSSNP NSNPNPPESS
201: SNPNPPVTVP NPPESSSNPN PPESSSNPNP PITIPYPPES SSPNPPEIVP SPPESGYTPG PVLGPPYSEP GPSTPTGSIP SPSSGFLPPI VYPPPMAPPS
301: PSVTPTSAYW CVAKPSVPDP IIQEAMNFAC GSGADCHSIQ PNGPCFKPNT LWAHASFAYN SYWQRTKSTG GSCTFGGTGM LVTVDPSFNG CHFDFF
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.