Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55823 | Soybean | extracellular | 55.17 | 55.17 |
| KRH25694 | Soybean | extracellular | 54.6 | 54.91 |
| CDX98264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.43 | 50.59 |
| Bra003318.1-P | Field mustard | extracellular | 48.28 | 49.41 |
| GSMUA_Achr10P... | Banana | extracellular | 49.43 | 48.59 |
| CDY56240 | Canola | extracellular | 48.28 | 48.55 |
| KRH27014 | Soybean | extracellular | 47.13 | 46.86 |
| Os06t0537700-01 | Rice | extracellular | 47.13 | 44.09 |
| KRH22312 | Soybean | extracellular | 45.4 | 43.17 |
| OQU76517 | Sorghum | extracellular | 43.1 | 43.1 |
| CDX79873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 43.68 | 42.46 |
| Bra004688.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 43.68 | 42.22 |
| CDY70929 | Canola | extracellular | 43.68 | 42.22 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 43.1 | 42.13 |
| TraesCS7A01G346300.1 | Wheat | endoplasmic reticulum, plasma membrane | 43.1 | 42.13 |
| Zm00001d046155_P001 | Maize | extracellular | 42.53 | 42.05 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 54.02 | 41.78 |
| TraesCS7B01G236800.1 | Wheat | endoplasmic reticulum, extracellular | 42.53 | 41.57 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 22.99 | 34.19 |
| AT3G58100.2 | Thale cress | cytosol | 48.85 | 33.2 |
| HORVU0Hr1G021440.2 | Barley | plastid | 27.59 | 30.38 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 54.6 | 27.46 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 31.03 | 26.09 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 28.74 | 25.64 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 27.01 | 24.35 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 28.74 | 24.15 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 30.46 | 24.09 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 31.61 | 22.92 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 21.84 | 15.02 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 27.01 | 11.38 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 22.41 | 10.6 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 34.48 | 9.76 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 10.92 | 5.15 |
Protein Annotations
| EntrezGene:100267784 | wikigene:100267784 | MapMan:35.1 | ProteinID:CBI21947 | ProteinID:CBI21947.3 | UniProt:E0CTN1 |
| EMBL:FN595235 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | EntrezGene:LOC100267784 | wikigene:LOC100267784 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 |
| SMART:SM00768 | SignalP:SignalP-noTM | UniParc:UPI00015C9543 | ArrayExpress:VIT_12s0028g02540 | EnsemblPlantsGene:VIT_12s0028g02540 | EnsemblPlants:VIT_12s0028g02540.t01 |
| unigene:Vvi.17211 | InterPro:X8 | RefSeq:XP_002279275 | RefSeq:XP_002279275.1 | RefSeq:XP_019078802.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:-:3294539..3297128
Molecular Weight (calculated)
18358.9 Da
IEP (calculated)
5.512
GRAVY (calculated)
0.257
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFSLFLFLL LTVTLPLHSL AAQSKAQNGV VTLELWCVAK NNADNPALQT ALDWACGPGG ADCSPIQQGG PCYDSQDLQK TASFAFNDYY LKHGLSDDSC
101: GFDNTAALTS LNPSFGNCKF PSSFTVSNGS FVGSTNTMGM GPASADLSGC SRIAGRWVQA LITVHLLIAV ILIL
101: GFDNTAALTS LNPSFGNCKF PSSFTVSNGS FVGSTNTMGM GPASADLSGC SRIAGRWVQA LITVHLLIAV ILIL
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.