Factsheet for PGSC0003DMT400024290

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g053430.2.1	Tomato	endoplasmic reticulum, extracellular	59.25	91.11
VIT_12s0028g02540.t01	Wine grape	extracellular	27.46	54.6
KRH55823	Soybean	extracellular	26.59	52.87
KRH25694	Soybean	extracellular	26.3	52.6
GSMUA_Achr10P...	Banana	extracellular	23.99	46.89
KRH27014	Soybean	extracellular	23.7	46.86
TraesCS7A01G346300.1	Wheat	endoplasmic reticulum, plasma membrane	23.12	44.94
TraesCS7B01G236800.1	Wheat	endoplasmic reticulum, extracellular	22.83	44.38
TraesCS7D01G332800.1	Wheat	plasma membrane	22.54	43.82
OQU76517	Sorghum	extracellular	21.97	43.68
Bra003318.1-P	Field mustard	extracellular	21.39	43.53
CDY56240	Canola	extracellular	21.68	43.35
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.1	42.94
Zm00001d046155_P001	Maize	extracellular	21.68	42.61
Os06t0537700-01	Rice	extracellular	22.83	42.47
KRH22312	Soybean	extracellular	21.97	41.53
PGSC0003DMT400015724	Potato	extracellular	13.01	39.47
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.23	39.11
Bra004688.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	20.23	38.89
PGSC0003DMT400059279	Potato	cytosol	13.29	38.66
CDY70929	Canola	extracellular	19.94	38.33
HORVU0Hr1G021440.2	Barley	plastid	16.47	36.08
PGSC0003DMT400034582	Potato	extracellular	11.85	35.34
AT3G58100.2	Thale cress	cytosol	22.25	30.08
PGSC0003DMT400045877	Potato	extracellular	9.25	29.91
PGSC0003DMT400063348	Potato	extracellular	13.87	25.95
PGSC0003DMT400072939	Potato	extracellular	14.45	24.27
PGSC0003DMT400080365	Potato	endoplasmic reticulum, extracellular	13.87	23.53
PGSC0003DMT400003054	Potato	extracellular	12.43	22.51
PGSC0003DMT400011608	Potato	mitochondrion	12.14	22.34
PGSC0003DMT400044716	Potato	extracellular	14.16	20.08
PGSC0003DMT400047134	Potato	extracellular, golgi, vacuole	16.76	16.02
PGSC0003DMT400025000	Potato	nucleus	11.56	14.39
PGSC0003DMT400038538	Potato	plasma membrane, vacuole	13.01	11.39

Protein Annotations

EnsemblPlants:PGSC0003DMT400024290	EnsemblPlantsGene:PGSC0003DMG401009389	EntrezGene:102592342	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98
PFAM:PF07983	PGSC:PGSC0003DMG401009389	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI000295280B
UniProt:M1AJU0	MapMan:35.1	:	:	:	:

Description

Hydrolase, hydrolyzing O-glycosyl compounds [Source:PGSC_GENE;Acc:PGSC0003DMG401009389]

Coordinates

chr7:+:49898678..49902130

Molecular Weight (calculated)

35588.2 Da

IEP (calculated)

7.762

GRAVY (calculated)

0.052

Length

346 amino acids

Sequence
(BLAST)

001: MSLKFSFSLL LFSLISTLST AQFGGTGSAP AGTGTAPGGV GTTPGGTGTT PGGAVTSPSG VGSAPGGTSA APAGGTATGG GGGATVELWC VAKNNAEDTA
101: LQSALDWACG PGGANCGPIQ PGGSCYDPKD IQKTASYVFN DYFIKHGMTE DACNFDNTAA LISINPSHNG CKFPSRVGIG SGSGSNLLSE IGVEVGLGSR
201: IGIMIKVMVE SRMRPQLRSG LGSRVWVSGK SQCRGKILGQ GGWVGLDSVR VELNNIRHYT YIVSFIHMIL GYPHFYYAEA PLDYLVSQFF GFELNPSKNS
301: SGSSSGSTNG GLSPSSEDLS SGSSILRRWM YILMAINLLF ASQLIF

Best Arabidopsis Sequence Match ( AT3G58100.2 )
(BLAST)

001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL

Arabidopsis Description

PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.