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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003318.1-P Field mustard extracellular 97.65 97.65
CDY56240 Canola extracellular 94.12 92.49
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 57.65 54.75
CDY70929 Canola extracellular 57.06 53.89
AT3G58100.2 Thale cress cytosol 76.47 50.78
VIT_12s0028g02540.t01 Wine grape extracellular 50.59 49.43
KRH25694 Soybean extracellular 43.53 42.77
KRH55823 Soybean extracellular 42.35 41.38
GSMUA_Achr10P... Banana extracellular 42.94 41.24
OQU76517 Sorghum extracellular 40.0 39.08
Zm00001d046155_P001 Maize extracellular 40.0 38.64
KRH27014 Soybean extracellular 39.41 38.29
TraesCS7D01G332800.1 Wheat plasma membrane 40.0 38.2
TraesCS7A01G346300.1 Wheat endoplasmic reticulum, plasma membrane 40.0 38.2
CDY56715 Canola cytosol 25.29 38.05
TraesCS7B01G236800.1 Wheat endoplasmic reticulum, extracellular 39.41 37.64
Os06t0537700-01 Rice extracellular 40.0 36.56
KRH22312 Soybean extracellular 38.24 35.52
CDY48582 Canola cytosol 27.65 33.1
CDY21992 Canola cytosol 27.65 33.1
Solyc07g053430.2.1 Tomato endoplasmic reticulum, extracellular 42.94 32.44
CDX74636 Canola extracellular 22.35 31.93
CDY47296 Canola extracellular 21.76 31.09
CDX90730 Canola endoplasmic reticulum, extracellular 22.35 30.4
CDY05067 Canola endoplasmic reticulum, extracellular 21.76 29.84
HORVU0Hr1G021440.2 Barley plastid 27.06 29.11
CDY72034 Canola endoplasmic reticulum, extracellular 20.59 28.93
CDY16115 Canola extracellular 21.76 23.87
CDY65418 Canola cytosol 20.0 23.13
CDY47357 Canola endoplasmic reticulum, extracellular 24.71 22.46
CDY51213 Canola extracellular 21.18 22.36
CDY02987 Canola extracellular 21.18 22.36
CDY16114 Canola extracellular 23.53 22.35
CDY01142 Canola extracellular 24.71 22.22
CDY16822 Canola extracellular 25.88 22.11
CDY33795 Canola extracellular 22.94 21.79
CDX87201 Canola extracellular 25.29 21.61
PGSC0003DMT400024290 Potato extracellular, vacuole 42.94 21.1
CDX96880 Canola extracellular 21.18 20.93
CDX69983 Canola extracellular 25.88 20.75
CDX83826 Canola extracellular 22.35 20.65
CDY02169 Canola extracellular 23.53 20.62
CDX96707 Canola extracellular 22.35 20.54
CDY42854 Canola extracellular 23.53 20.51
CDY23085 Canola extracellular, plasma membrane, vacuole 22.94 20.21
CDY34558 Canola extracellular 20.0 19.77
CDY19232 Canola extracellular 21.76 19.68
CDX99038 Canola extracellular 27.06 19.57
CDY26741 Canola extracellular 21.18 19.35
CDX97778 Canola extracellular 25.88 19.21
CDY29629 Canola extracellular 25.88 19.21
CDY54140 Canola extracellular 23.53 19.14
CDY50312 Canola extracellular 23.53 18.6
CDY07353 Canola extracellular 23.53 18.35
CDX98134 Canola extracellular 20.59 18.32
CDY04273 Canola extracellular 22.94 17.89
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 20.59 17.86
CDY65205 Canola plasma membrane 20.59 17.68
CDY36415 Canola extracellular 20.0 17.35
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 24.12 17.3
CDX99818 Canola extracellular 29.41 16.95
CDX94970 Canola plastid 29.41 16.89
CDY64750 Canola endoplasmic reticulum, vacuole 29.41 16.61
CDY43335 Canola extracellular 28.82 16.61
CDY48334 Canola vacuole 29.41 15.92
CDX90189 Canola extracellular 28.24 15.29
CDY31085 Canola plastid 28.24 13.68
CDY32184 Canola vacuole 28.24 13.6
CDY56795 Canola cytosol, nucleus, plastid, vacuole 20.59 11.18
CDY47016 Canola extracellular 24.12 11.02
CDY37850 Canola vacuole 21.18 9.47
CDY43577 Canola vacuole 21.18 9.42
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 18.82 8.31
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 18.82 8.23
Protein Annotations
EnsemblPlants:CDX98264EnsemblPlantsGene:GSBRNA2T00105788001Gene3D:1.20.58.1040GO:A0A078EBU8GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF98PFAM:PF07983ProteinID:CDX98264
ProteinID:CDX98264.1SEG:segSignalP:SignalP-noTMSMART:SM00768TMHMM:TMhelixUniParc:UPI0004EC4FB2
MapMan:35.1:::::
Description
BnaC06g16250D
Coordinates
chrLK031904:-:190642..191874
Molecular Weight (calculated)
18256.7 Da
IEP (calculated)
6.221
GRAVY (calculated)
-0.035
Length
170 amino acids
Sequence
(BLAST)
001: MTLPHLHLSL LAATAIMLVA IADAQAGGQV LQAELWCVAK NNAEDSSLQT AIDWACGQGG ADCSPIQQGR ACNDPTDIQK MASYVFNNYY LKNGLADDAC
101: NFNNNAALTS INPSQGTCRY PSSKRVSNGR VADDTSMGSG QADMSRGRRV STTWILLAFT ILMVTWIIHL
Best Arabidopsis Sequence Match ( AT3G58100.2 )
(BLAST)
001: MIHPNLSLFH ETFQNILESI QIHSLVTVRS SSFSDTFNGN FLVLHCKISG YKKKTQNLLL NTPLLDLLPL SLLSSEMIMS LPQCSHLRLS ILAATAAMLM
101: VITTAQIGGQ VIQVELWCVA KNNAEDSSLQ TAIEWACGQG GADCGPIQQG GPCNDPTDVQ KMASFVFNNY YLKNGEEDEA CNFNNNAALT SLNPSQGTCK
201: YPSSKGANNG RLADDTSMGA GQADMSRGGR PISSSWMVTF IGFGSLLTMT WIIHHL
Arabidopsis Description
PDCB5Plasmodesmata callose-binding protein 5 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.