CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74636	Canola	extracellular	94.96	94.96
AT5G35740.1	Thale cress	extracellular	86.55	86.55
VIT_12s0057g00700.t01	Wine grape	extracellular	67.23	68.38
KRH14105	Soybean	extracellular	66.39	66.95
KRH74013	Soybean	extracellular	64.71	65.25
KRH51177	Soybean	extracellular	63.03	64.66
PGSC0003DMT400015724	Potato	extracellular	60.5	63.16
Solyc07g047710.2.1	Tomato	extracellular	57.98	60.53
Solyc11g012580.1.1	Tomato	extracellular	53.78	54.7
GSMUA_Achr9P09230_001	Banana	extracellular	55.46	54.55
GSMUA_Achr11P...	Banana	extracellular	53.78	53.78
PGSC0003DMT400034582	Potato	extracellular	52.1	53.45
TraesCS5D01G400600.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	57.98	49.64
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	57.14	49.63
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	54.62	46.76
HORVU5Hr1G095450.3	Barley	extracellular	50.42	45.11
CDY05067	Canola	endoplasmic reticulum, extracellular	45.38	43.55
CDX90730	Canola	endoplasmic reticulum, extracellular	43.7	41.6
CDY72034	Canola	endoplasmic reticulum, extracellular	41.18	40.5
CDY56715	Canola	cytosol	35.29	37.17
CDY21992	Canola	cytosol	36.13	30.28
CDY48582	Canola	cytosol	36.13	30.28
CDY01142	Canola	extracellular	41.18	25.93
CDY47357	Canola	endoplasmic reticulum, extracellular	40.34	25.67
CDY16115	Canola	extracellular	31.09	23.87
CDX97778	Canola	extracellular	43.7	22.71
CDY29629	Canola	extracellular	43.7	22.71
CDY26741	Canola	extracellular	34.45	22.04
CDY19232	Canola	extracellular	34.45	21.81
CDX98264	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.09	21.76
CDX83826	Canola	extracellular	33.61	21.74
CDY65205	Canola	plasma membrane	36.13	21.72
CDX96707	Canola	extracellular	33.61	21.62
CDX96880	Canola	extracellular	31.09	21.51
CDY34558	Canola	extracellular	31.09	21.51
CDX79873	Canola	endoplasmic reticulum, extracellular, plasma membrane	31.93	21.23
CDY51213	Canola	extracellular	28.57	21.12
CDY02987	Canola	extracellular	28.57	21.12
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	34.45	20.92
CDY56240	Canola	extracellular	30.25	20.81
CDY70929	Canola	extracellular	31.09	20.56
CDY33795	Canola	extracellular	30.25	20.11
CDY16114	Canola	extracellular	30.25	20.11
CDY54140	Canola	extracellular	35.29	20.1
CDY65418	Canola	cytosol	24.37	19.73
CDY07353	Canola	extracellular	36.13	19.72
CDY04273	Canola	extracellular	36.13	19.72
CDY50312	Canola	extracellular	35.29	19.53
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.82	18.99
CDX98134	Canola	extracellular	30.25	18.85
CDX87201	Canola	extracellular	31.09	18.59
CDY16822	Canola	extracellular	31.09	18.59
CDY02169	Canola	extracellular	30.25	18.56
CDY42854	Canola	extracellular	30.25	18.46
CDY23085	Canola	extracellular, plasma membrane, vacuole	29.41	18.13
CDX99818	Canola	extracellular	44.54	17.97
CDY43335	Canola	extracellular	44.54	17.97
CDY36415	Canola	extracellular	29.41	17.86
CDX69983	Canola	extracellular	31.09	17.45
CDY48334	Canola	vacuole	44.54	16.88
CDX90189	Canola	extracellular	44.54	16.88
CDX99038	Canola	extracellular	31.09	15.74
CDX94970	Canola	plastid	37.82	15.2
CDY64750	Canola	endoplasmic reticulum, vacuole	37.82	14.95
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	36.97	14.06
CDY31085	Canola	plastid	36.13	12.25
CDY32184	Canola	vacuole	36.13	12.18
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	37.82	11.69
CDY37850	Canola	vacuole	36.97	11.58
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	37.82	11.57
CDY43577	Canola	vacuole	36.97	11.52
CDY47016	Canola	extracellular	30.25	9.68

Protein Annotations

EnsemblPlants:CDY47296	EnsemblPlantsGene:GSBRNA2T00087121001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118	PFAM:PF07983
ProteinID:CDY47296	ProteinID:CDY47296.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	UniParc:UPI0004EE9DC5
UniProt:A0A078IBT2	MapMan:35.1	:	:	:	:

Description

BnaC04g29770DBnaC04g29770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBT2]

Coordinates

chrLK032706:-:140809..141418

Molecular Weight (calculated)

13365.7 Da

IEP (calculated)

4.783

GRAVY (calculated)

-0.347

Length

119 amino acids

Sequence
(BLAST)

001: MSTFLMRILL ALLVLAFTVS QQLEAESEQW CIADEQTPDD ELQAALDWAC SKGGADCSKM QQQNQPCFLP NTIRDHASVA FNSYYQTYKH KGGSCYFKGA
101: AMITELDPSH GSCHYEYKP

Best Arabidopsis Sequence Match ( AT5G35740.1 )
(BLAST)

001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP

Arabidopsis Description

At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.