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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23085 Canola extracellular, plasma membrane, vacuole 94.85 95.34
Bra012981.1-P Field mustard extracellular, vacuole 99.48 86.94
CDY42854 Canola extracellular 87.11 86.67
CDX87201 Canola extracellular 85.57 83.42
CDY16822 Canola extracellular 84.02 81.91
AT5G61130.1 Thale cress extracellular 82.47 79.6
CDX69983 Canola extracellular 65.46 59.91
CDY26741 Canola extracellular 51.03 53.23
CDX99038 Canola extracellular 63.92 52.77
CDX83826 Canola extracellular 50.0 52.72
CDY19232 Canola extracellular 50.52 52.13
CDX96707 Canola extracellular 49.48 51.89
GSMUA_Achr4P23440_001 Banana cytosol 34.54 44.67
CDY47016 Canola extracellular 84.54 44.09
GSMUA_Achr7P26650_001 Banana extracellular 25.77 43.1
TraesCS5B01G399400.1 Wheat extracellular 35.05 43.04
GSMUA_Achr4P32790_001 Banana endoplasmic reticulum, extracellular, plasma membrane 39.69 42.78
CDY16115 Canola extracellular 34.02 42.58
GSMUA_Achr9P07140_001 Banana extracellular 40.72 42.47
CDY16114 Canola extracellular 39.18 42.46
CDY33795 Canola extracellular 38.14 41.34
GSMUA_Achr1P04440_001 Banana endoplasmic reticulum, extracellular, vacuole 40.72 41.15
TraesCS5B01G398000.1 Wheat extracellular 34.02 40.24
CDY34558 Canola extracellular 35.05 39.53
CDX96880 Canola extracellular 34.54 38.95
TraesCS5A01G393200.1 Wheat extracellular 33.51 38.92
TraesCS2D01G185800.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.69 38.89
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 38.14 38.74
Zm00001d006776_P001 Maize endoplasmic reticulum, extracellular, vacuole 39.69 38.69
Zm00001d006777_P003 Maize endoplasmic reticulum, extracellular, vacuole 39.69 38.69
EER97492 Sorghum extracellular 38.66 38.66
Os07t0600700-01 Rice extracellular 38.66 38.66
TraesCS5D01G403000.1 Wheat extracellular 32.99 38.55
Os03t0756300-01 Rice extracellular 34.54 38.29
TraesCS2A01G177600.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.18 38.0
CDY02987 Canola extracellular 31.44 37.89
CDY51213 Canola extracellular 31.44 37.89
CDX98134 Canola extracellular 36.6 37.17
Zm00001d022059_P001 Maize endoplasmic reticulum, extracellular 37.63 36.87
CDY36415 Canola extracellular 37.11 36.73
Os03t0421800-01 Rice endoplasmic reticulum, extracellular, vacuole 35.57 36.7
TraesCS2B01G204700.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.66 36.59
HORVU4Hr1G028360.1 Barley peroxisome, plastid 23.71 36.51
GSMUA_Achr5P08900_001 Banana extracellular 35.57 36.32
GSMUA_Achr8P28170_001 Banana extracellular 28.87 36.13
CDY65418 Canola cytosol 27.32 36.05
TraesCS6D01G099100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.05 35.79
Zm00001d043361_P001 Maize endoplasmic reticulum, extracellular 34.54 35.64
OQU87600 Sorghum extracellular 33.51 34.57
TraesCS6B01G138700.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.05 34.34
TraesCS3A01G302400.1 Wheat extracellular 34.54 34.18
TraesCS3D01G299600.1 Wheat extracellular 34.54 34.18
TraesCS6A01G110400.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.54 34.01
Os01t0763900-01 Rice extracellular 35.57 33.33
CDY40247 Canola endoplasmic reticulum, extracellular, vacuole 32.99 32.65
CDY65205 Canola plasma membrane 32.99 32.32
CDY01142 Canola extracellular 31.44 32.28
GSMUA_Achr4P10810_001 Banana endoplasmic reticulum, nucleus, plasma membrane 39.69 31.69
CDY47357 Canola endoplasmic reticulum, extracellular 30.41 31.55
Zm00001d047293_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.44 31.12
CDX74636 Canola extracellular 19.07 31.09
EER92116 Sorghum endoplasmic reticulum, extracellular, vacuole 31.44 30.96
Zm00001d029539_P001 Maize endoplasmic reticulum, extracellular, vacuole 31.44 30.5
CDY47296 Canola extracellular 18.56 30.25
CDY56715 Canola cytosol 17.53 30.09
Zm00001d013250_P003 Maize extracellular 34.54 29.91
HORVU1Hr1G077100.2 Barley endoplasmic reticulum, extracellular, vacuole 31.96 29.38
Zm00001d010728_P005 Maize extracellular 32.47 28.77
TraesCS1B01G346200.2 Wheat endoplasmic reticulum, extracellular, vacuole 30.93 28.71
CDY04273 Canola extracellular 31.96 28.44
CDY07353 Canola extracellular 31.96 28.44
Os05t0512600-01 Rice extracellular 32.99 28.07
CDY54140 Canola extracellular 29.9 27.75
TraesCS1D01G335200.1 Wheat endoplasmic reticulum, extracellular, vacuole 30.93 27.65
EES18492 Sorghum extracellular 32.47 27.51
HORVU6Hr1G019780.4 Barley endoplasmic reticulum, extracellular 31.96 27.43
CDY05067 Canola endoplasmic reticulum, extracellular 17.53 27.42
CDY72034 Canola endoplasmic reticulum, extracellular 17.01 27.27
CDX90730 Canola endoplasmic reticulum, extracellular 17.53 27.2
CDY50312 Canola extracellular 29.9 26.98
TraesCS1A01G332500.1 Wheat extracellular 28.87 26.79
Zm00001d034062_P001 Maize cytosol, golgi, peroxisome 33.51 26.64
CDY40909 Canola endoplasmic reticulum, extracellular, plasma membrane 31.96 26.16
Zm00001d038682_P001 Maize extracellular 30.93 26.09
TraesCS5A01G548300.1 Wheat plasma membrane 26.29 26.02
HORVU2Hr1G033470.1 Barley cytosol, plastid 39.69 25.93
KXG37528 Sorghum mitochondrion 35.05 25.66
HORVU5Hr1G096090.6 Barley plastid 30.93 25.64
CDY21992 Canola cytosol 18.56 25.35
CDY48582 Canola cytosol 18.56 25.35
TraesCS3B01G334200.1 Wheat golgi, nucleus, plasma membrane 35.05 24.73
CDX98264 Canola endoplasmic reticulum, extracellular, plasma membrane 20.62 23.53
CDX79873 Canola endoplasmic reticulum, extracellular, plasma membrane 21.65 23.46
HORVU3Hr1G074010.3 Barley cytosol, plastid 35.05 23.37
CDY56240 Canola extracellular 20.1 22.54
CDY70929 Canola extracellular 20.1 21.67
CDX99818 Canola extracellular 27.32 17.97
CDX94970 Canola plastid 27.32 17.91
CDY64750 Canola endoplasmic reticulum, vacuole 27.32 17.61
CDX97778 Canola extracellular 20.62 17.47
CDY29629 Canola extracellular 20.62 17.47
CDY43335 Canola extracellular 26.29 17.29
CDX90189 Canola extracellular 27.32 16.88
CDY48334 Canola vacuole 27.32 16.88
CDY31085 Canola plastid 26.8 14.81
CDY32184 Canola vacuole 26.8 14.73
CDY56795 Canola cytosol, nucleus, plastid, vacuole 19.59 12.14
CDY37850 Canola vacuole 21.65 11.05
CDY43577 Canola vacuole 21.65 10.99
CDX87377 Canola endoplasmic reticulum, extracellular, vacuole 20.62 10.39
CDX88545 Canola endoplasmic reticulum, extracellular, vacuole 20.62 10.28
Protein Annotations
EnsemblPlants:CDY02169EnsemblPlantsGene:GSBRNA2T00113574001InterPro:X8PANTHER:PTHR32227PANTHER:PTHR32227:SF237PFAM:PF07983
ProteinID:CDY02169ProteinID:CDY02169.1SEG:segSignalP:SignalP-noTMSMART:SM00768UniParc:UPI0004EF0516
MapMan:35.1:::::
Description
BnaA03g39980D
Coordinates
chrLK031932:+:494308..496424
Molecular Weight (calculated)
19922.1 Da
IEP (calculated)
6.472
GRAVY (calculated)
-0.093
Length
194 amino acids
Sequence
(BLAST)
001: MAALVLSLLL LAMAGHSSAS WCVCKTGLSD TVLQSTLDYA CGNGADCNPT HPKAPCFDPD NVRSHCNYAV NSFFQKKHQA PGTCDFSGTA TPTNSDPSYS
101: GCTFPTSASG SGSSTTVTPG TTNPKGSSTT LPGGNGNSPF SGTSSTNGVF GNNSTGINPD YTTESSAFAL RNSSTFLTYL LLIALSGFCS FMML
Best Arabidopsis Sequence Match ( AT5G61130.1 )
(BLAST)
001: MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT
101: GCAFPTSASG SSGSTTVTPG TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS SKLFICLLLI ASSGFCSFLM
201: L
Arabidopsis Description
PDCB1PDCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178URD1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.