Factsheet for GSMUA_Achr4P23440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P32790_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	70.0	58.33
GSMUA_Achr9P07140_001	Banana	extracellular	66.67	53.76
GSMUA_Achr5P08900_001	Banana	extracellular	67.33	53.16
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	67.33	52.88
KRH54678	Soybean	extracellular, nucleus	38.0	51.35
GSMUA_Achr1P04440_001	Banana	endoplasmic reticulum, extracellular, vacuole	65.33	51.04
GSMUA_Achr7P26650_001	Banana	extracellular	36.0	46.55
Solyc03g115200.2.1	Tomato	extracellular	58.0	46.52
PGSC0003DMT400063348	Potato	extracellular	57.33	46.49
PGSC0003DMT400045877	Potato	extracellular	32.67	45.79
GSMUA_Achr8P28170_001	Banana	extracellular	44.67	43.23
VIT_17s0000g07260.t01	Wine grape	extracellular	58.67	42.51
KRH03122	Soybean	extracellular, nucleus	55.33	40.89
CDY19232	Canola	extracellular	50.67	40.43
VIT_01s0011g00570.t01	Wine grape	extracellular	51.33	39.9
CDY26741	Canola	extracellular	49.33	39.78
KRG89485	Soybean	extracellular	46.67	39.77
CDX96707	Canola	extracellular	48.0	38.92
KRH50525	Soybean	extracellular	47.33	38.8
AT1G18650.1	Thale cress	extracellular	47.33	38.59
CDX83826	Canola	extracellular	47.33	38.59
KRH56823	Soybean	extracellular	54.0	38.03
KRH75030	Soybean	extracellular	54.0	37.67
KRH70882	Soybean	extracellular	52.67	36.41
Bra035941.1-P	Field mustard	extracellular	48.0	36.18
GSMUA_Achr4P10810_001	Banana	endoplasmic reticulum, nucleus, plasma membrane	57.33	35.39
CDX87201	Canola	extracellular	46.67	35.18
PGSC0003DMT400003054	Potato	extracellular	44.67	35.08
CDY42854	Canola	extracellular	45.33	34.87
CDY16822	Canola	extracellular	46.0	34.67
CDY02169	Canola	extracellular	44.67	34.54
Bra026879.1-P	Field mustard	extracellular	32.67	34.51
Bra029334.1-P	Field mustard	extracellular	44.67	34.36
GSMUA_Achr3P16040_001	Banana	mitochondrion	32.0	34.29
CDY23085	Canola	extracellular, plasma membrane, vacuole	44.0	34.2
Solyc05g012380.2.1	Tomato	extracellular	45.33	33.66
Bra026878.1-P	Field mustard	extracellular	31.33	33.33
Solyc01g010310.2.1	Tomato	extracellular	42.0	33.33
CDY16114	Canola	extracellular	39.33	32.96
CDY16115	Canola	extracellular	34.0	32.9
CDY65418	Canola	cytosol	32.0	32.65
GSMUA_Achr6P27540_001	Banana	extracellular	40.0	32.61
PGSC0003DMT400072939	Potato	extracellular	44.67	32.52
CDY33795	Canola	extracellular	38.67	32.4
Bra026880.1-P	Field mustard	extracellular	38.67	32.4
AT5G08000.2	Thale cress	extracellular	45.33	31.92
Bra025116.1-P	Field mustard	extracellular	34.0	31.68
AT5G61130.1	Thale cress	extracellular	42.0	31.34
GSMUA_Achr11P...	Banana	extracellular	24.67	31.09
AT2G03505.1	Thale cress	extracellular	34.67	30.95
Bra012458.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	40.0	30.61
CDY40247	Canola	endoplasmic reticulum, extracellular, vacuole	40.0	30.61
GSMUA_Achr9P09230_001	Banana	extracellular	24.67	30.58
CDY02987	Canola	extracellular	32.67	30.43
CDY51213	Canola	extracellular	32.67	30.43
CDY04273	Canola	extracellular	44.0	30.28
Bra012981.1-P	Field mustard	extracellular, vacuole	44.67	30.18
Bra019700.1-P	Field mustard	extracellular	39.33	29.95
CDY07353	Canola	extracellular	43.33	29.82
Bra004003.1-P	Field mustard	extracellular	43.33	29.82
CDY65205	Canola	plasma membrane	39.33	29.8
CDX69983	Canola	extracellular	42.0	29.72
Bra009313.1-P	Field mustard	extracellular	42.0	29.72
CDY54140	Canola	extracellular	41.33	29.67
CDX96880	Canola	extracellular	34.0	29.65
CDY34558	Canola	extracellular	34.0	29.65
Bra016724.1-P	Field mustard	extracellular	34.0	29.65
CDY36415	Canola	extracellular	38.67	29.59
CDY50312	Canola	extracellular	42.0	29.3
AT1G69295.1	Thale cress	extracellular	42.67	28.83
CDX98134	Canola	extracellular	36.67	28.8
GSMUA_Achr7P07950_001	Banana	extracellular	25.33	28.57
GSMUA_Achr10P...	Banana	extracellular	33.33	28.25
Bra038314.1-P	Field mustard	mitochondrion	42.0	27.88
CDX99038	Canola	extracellular	42.67	27.23
AT1G13830.2	Thale cress	mitochondrion, peroxisome, plastid, vacuole	38.0	27.01
AT1G26450.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	35.33	26.9
CDY40909	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.0	26.58
GSMUA_Achr3P31190_001	Banana	cytosol, nucleus, plastid	26.0	26.17
GSMUA_Achr5P24740_001	Banana	endoplasmic reticulum, extracellular	24.0	25.17
GSMUA_Achr9P07170_001	Banana	extracellular	29.33	24.58
Solyc04g005420.2.1	Tomato	extracellular, vacuole	46.0	22.48
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	28.67	20.87
CDY47016	Canola	extracellular	45.33	18.28
GSMUA_Achr4P14960_001	Banana	endoplasmic reticulum, extracellular	28.67	18.07
GSMUA_Achr6P00220_001	Banana	nucleus	30.0	14.85
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	25.33	10.73
GSMUA_Achr11P...	Banana	extracellular, plastid, vacuole	34.0	9.68
GSMUA_Achr2P02010_001	Banana	cytosol	27.33	8.74

Protein Annotations

EnsemblPlants:GSMUA_Achr4P23440_001	EnsemblPlants:GSMUA_Achr4T23440_001	EnsemblPlantsGene:GSMUA_Achr4G23440_001	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF118
PFAM:PF07983	SEG:seg	SMART:SM00768	UniParc:UPI0002961C1A	UniProt:M0SRF5	MapMan:35.1

Description

X8 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G23440_001]

Coordinates

chr4:+:23521212..23522365

Molecular Weight (calculated)

14990.5 Da

IEP (calculated)

4.810

GRAVY (calculated)

-0.008

Length

150 amino acids

Sequence
(BLAST)

001: MSDTALQKTL DYACGAGADC TPILQNGACY NPNTVKAHCS YAANSYYQRK GQAQGTCDFS GTAALATTDP SYSGCTFPAT ASAAGTGSTP ATTTPGTTPG
101: TFSPTSGVVG GLGPSSSMSN EDMSHGEFLM KAGMGSLLLT VICSLMALLG

Best Arabidopsis Sequence Match ( AT1G18650.1 )
(BLAST)

001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS

Arabidopsis Description

PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.