Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400045877 | Potato | extracellular | 33.16 | 59.81 |
KRH75030 | Soybean | extracellular | 62.18 | 55.81 |
KRG89485 | Soybean | extracellular | 50.78 | 55.68 |
VIT_17s0000g07260.t01 | Wine grape | extracellular | 59.59 | 55.56 |
KRH50525 | Soybean | extracellular | 51.3 | 54.1 |
KRH70882 | Soybean | extracellular | 60.62 | 53.92 |
Bra026879.1-P | Field mustard | extracellular | 38.34 | 52.11 |
GSMUA_Achr4P23440_001 | Banana | cytosol | 39.9 | 51.33 |
GSMUA_Achr4P32790_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 46.63 | 50.0 |
Bra026878.1-P | Field mustard | extracellular | 35.75 | 48.94 |
CDY16115 | Canola | extracellular | 38.86 | 48.39 |
Bra026880.1-P | Field mustard | extracellular | 44.56 | 48.04 |
CDY16114 | Canola | extracellular | 44.56 | 48.04 |
CDY33795 | Canola | extracellular | 44.56 | 48.04 |
GSMUA_Achr9P07140_001 | Banana | extracellular | 44.56 | 46.24 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 45.6 | 46.07 |
GSMUA_Achr1P04440_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 45.6 | 45.83 |
AT2G03505.1 | Thale cress | extracellular | 39.9 | 45.83 |
GSMUA_Achr7P26650_001 | Banana | extracellular | 27.46 | 45.69 |
CDY65418 | Canola | cytosol | 34.2 | 44.9 |
CDY34558 | Canola | extracellular | 39.38 | 44.19 |
CDX96880 | Canola | extracellular | 39.38 | 44.19 |
Bra016724.1-P | Field mustard | extracellular | 39.38 | 44.19 |
CDY51213 | Canola | extracellular | 36.27 | 43.48 |
CDY02987 | Canola | extracellular | 36.27 | 43.48 |
Bra025116.1-P | Field mustard | extracellular | 36.27 | 43.48 |
GSMUA_Achr8P28170_001 | Banana | extracellular | 34.72 | 43.23 |
GSMUA_Achr5P08900_001 | Banana | extracellular | 42.49 | 43.16 |
EER97492 | Sorghum | extracellular | 38.86 | 38.66 |
Os07t0600700-01 | Rice | extracellular | 38.86 | 38.66 |
TraesCS5B01G398000.1 | Wheat | extracellular | 32.64 | 38.41 |
TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 39.38 | 38.38 |
Os03t0756300-01 | Rice | extracellular | 34.72 | 38.29 |
CDY36415 | Canola | extracellular | 38.34 | 37.76 |
TraesCS2A01G177600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 38.86 | 37.5 |
TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.79 | 37.37 |
TraesCS5D01G403000.1 | Wheat | extracellular | 32.12 | 37.35 |
Zm00001d043361_P001 | Maize | endoplasmic reticulum, extracellular | 36.27 | 37.23 |
Zm00001d006776_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.34 | 37.19 |
Zm00001d006777_P003 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.34 | 37.19 |
CDX98134 | Canola | extracellular | 36.79 | 37.17 |
TraesCS2B01G204700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 39.38 | 37.07 |
Bra019700.1-P | Field mustard | extracellular | 37.82 | 37.06 |
Zm00001d022059_P001 | Maize | endoplasmic reticulum, extracellular | 37.31 | 36.36 |
TraesCS6B01G138700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 37.31 | 36.36 |
Os03t0421800-01 | Rice | endoplasmic reticulum, extracellular, vacuole | 35.23 | 36.17 |
TraesCS5B01G399400.1 | Wheat | extracellular | 29.53 | 36.08 |
TraesCS6A01G110400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.79 | 36.04 |
TraesCS5A01G393200.1 | Wheat | extracellular | 31.09 | 35.93 |
TraesCS3D01G299600.1 | Wheat | extracellular | 35.75 | 35.2 |
TraesCS3A01G302400.1 | Wheat | extracellular | 35.75 | 35.2 |
Os01t0763900-01 | Rice | extracellular | 37.31 | 34.78 |
AT1G13830.2 | Thale cress | mitochondrion, peroxisome, plastid, vacuole | 37.82 | 34.6 |
OQU87600 | Sorghum | extracellular | 33.68 | 34.57 |
VIT_12s0057g00700.t01 | Wine grape | extracellular | 20.73 | 34.19 |
Zm00001d047293_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.72 | 34.18 |
HORVU4Hr1G028360.1 | Barley | peroxisome, plastid | 22.28 | 34.13 |
EER92116 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 34.72 | 34.01 |
GSMUA_Achr4P10810_001 | Banana | endoplasmic reticulum, nucleus, plasma membrane | 41.97 | 33.33 |
Zm00001d029539_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 34.2 | 33.0 |
Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 50.78 | 31.92 |
HORVU1Hr1G077100.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 34.2 | 31.28 |
TraesCS1B01G346200.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.16 | 30.62 |
TraesCS1A01G332500.1 | Wheat | extracellular | 33.16 | 30.62 |
VIT_05s0029g00190.t01 | Wine grape | extracellular | 34.72 | 30.45 |
TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.68 | 29.95 |
Os05t0512600-01 | Rice | extracellular | 34.72 | 29.39 |
Zm00001d013250_P003 | Maize | extracellular | 33.16 | 28.57 |
TraesCS5A01G548300.1 | Wheat | plasma membrane | 28.5 | 28.06 |
VIT_10s0003g02720.t01 | Wine grape | plastid | 27.98 | 27.69 |
Zm00001d034062_P001 | Maize | cytosol, golgi, peroxisome | 34.2 | 27.05 |
VIT_12s0028g02540.t01 | Wine grape | extracellular | 24.35 | 27.01 |
Zm00001d010728_P005 | Maize | extracellular | 30.57 | 26.94 |
HORVU6Hr1G019780.4 | Barley | endoplasmic reticulum, extracellular | 31.09 | 26.55 |
TraesCS3B01G334200.1 | Wheat | golgi, nucleus, plasma membrane | 36.79 | 25.82 |
EES18492 | Sorghum | extracellular | 30.57 | 25.76 |
KXG37528 | Sorghum | mitochondrion | 34.72 | 25.28 |
Zm00001d038682_P001 | Maize | extracellular | 30.05 | 25.22 |
VIT_12s0028g00050.t01 | Wine grape | extracellular | 31.09 | 25.0 |
HORVU2Hr1G033470.1 | Barley | cytosol, plastid | 38.34 | 24.92 |
VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 25.91 | 24.15 |
HORVU3Hr1G074010.3 | Barley | cytosol, plastid | 36.27 | 24.05 |
HORVU5Hr1G096090.6 | Barley | plastid | 27.98 | 23.08 |
VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 23.32 | 17.79 |
VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 20.73 | 10.87 |
VIT_14s0060g00440.t01 | Wine grape | vacuole | 33.16 | 10.41 |
VIT_07s0129g00230.t01 | Wine grape | vacuole | 21.76 | 10.17 |
VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 7.77 | 4.07 |
Protein Annotations
EntrezGene:100242217 | wikigene:100242217 | MapMan:35.1 | UniProt:A5AZD0 | EMBL:AM441219 | ProteinID:CAN73948 |
ProteinID:CAN73948.1 | ProteinID:CCB51076 | ProteinID:CCB51076.1 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | EntrezGene:LOC100242217 | wikigene:LOC100242217 |
PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF147 | SMART:SM00768 | SignalP:SignalP-noTM | TIGR:TC53309 |
TIGR:TC55624 | TIGR:TC68676 | UniParc:UPI000151FE04 | ArrayExpress:VIT_01s0011g00570 | EnsemblPlantsGene:VIT_01s0011g00570 | EnsemblPlants:VIT_01s0011g00570.t01 |
unigene:Vvi.7434 | InterPro:X8 | RefSeq:XP_002267413 | RefSeq:XP_002267413.2 | RefSeq:XP_003631162 | RefSeq:XP_003631162.1 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:523912..525943
Molecular Weight (calculated)
19554.6 Da
IEP (calculated)
5.430
GRAVY (calculated)
0.096
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVLVYFVLF LAMTGHSSAA VYCVCKDGLS DQALQKTLDY ACGAGADCSP VLQNGACYNP NTVKDHCSYA VNSYFQKKGQ ASGSCDFAGT ATQSQTNPSS
101: VSTCVYPTSA SSTGSSTTPS TTTPSTTTPS TTTPSTTTPS STTSPSVFGL GPSGSGGITS TDSSAAVAPL HCTDLFFSAA LTLWLSGLVL LWG
101: VSTCVYPTSA SSTGSSTTPS TTTPSTTTPS TTTPSTTTPS STTSPSVFGL GPSGSGGITS TDSSAAVAPL HCTDLFFSAA LTLWLSGLVL LWG
001: MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
101: TCPFPASASG SGTTTPVTTT PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF YLFS
Arabidopsis Description
PDCB3PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ86]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.