Factsheet for VIT_07s0129g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g06500.t01	Wine grape	cytosol, peroxisome, plastid	55.93	62.6
KRH77114	Soybean	extracellular, vacuole	54.24	56.71
KRH28365	Soybean	vacuole	54.0	56.03
PGSC0003DMT400038538	Potato	plasma membrane, vacuole	52.06	54.43
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	41.16	48.02
AT5G67460.1	Thale cress	vacuole	43.58	47.37
Bra031835.1-P	Field mustard	vacuole	42.86	46.7
CDY37850	Canola	vacuole	42.37	46.05
CDY43577	Canola	vacuole	41.16	44.5
Os10t0347000-01	Rice	endoplasmic reticulum, extracellular, vacuole	35.84	43.02
VIT_12s0057g00700.t01	Wine grape	extracellular	11.86	41.88
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	20.34	33.2
VIT_10s0003g02720.t01	Wine grape	plastid	13.32	28.21
VIT_12s0028g02540.t01	Wine grape	extracellular	11.38	27.01
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	23.0	25.82
VIT_12s0028g00050.t01	Wine grape	extracellular	14.53	25.0
VIT_10s0003g04340.t01	Wine grape	plasma membrane	12.35	24.64
VIT_17s0000g07260.t01	Wine grape	extracellular	12.35	24.64
VIT_05s0029g00190.t01	Wine grape	extracellular	12.11	22.73
VIT_01s0011g00570.t01	Wine grape	extracellular	10.17	21.76
VIT_14s0060g00440.t01	Wine grape	vacuole	21.55	14.47

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100254154	wikigene:100254154	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB57748
ProteinID:CCB57748.1	UniProt:F6HST8	EMBL:FN596246	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100254154	wikigene:LOC100254154	PFAM:PF00332	PFAM:PF07983
PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	TIGR:TC58455
TMHMM:TMhelix	UniParc:UPI0001983AEC	ArrayExpress:VIT_07s0129g00230	EnsemblPlantsGene:VIT_07s0129g00230	EnsemblPlants:VIT_07s0129g00230.t01	unigene:Vvi.21747
InterPro:X8	RefSeq:XP_002279597	RefSeq:XP_002279597.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:15497561..15499384

Molecular Weight (calculated)

44646.4 Da

IEP (calculated)

6.228

GRAVY (calculated)

-0.048

Length

413 amino acids

Sequence
(BLAST)

001: MLKMGSLFHI IIFFLTFLVL TGSSSESVEL LTLYDSSPVV LQAMSHTGVP IAVSVSEDDL NEVSGSVLMA ESWIRTHVLA HYPSTNITTI VVGNTVLCNK
101: DKEDKLRLVL PSLRNVYYSL TRWGLEKDIK VSAAFSSNCL NPDSVLDRDD LADKVIKPLL SFLELTNSTY SVHPPTNFSP LSDESAGLVS SHSESMKKLG
201: TSKLRVNVIV QSAKEGKPQS RKLSFMHSKF VEPYPARPTP LPELSPSPIY SSIGFSAPAN VAKNPLPPLP PLEGTASPPP MTFPFAPEMP PIVIPASPPY
301: SFSLPPCSPF EAGAPAPETG VKQGLWCVAK PSVPADTLQE AMDYACGGGG ADCEEIEPHG NCYYPDTVLA HASYAFNSYW QKHKKNGGTC SFGGTAMLIN
401: ADPSFLHCRF LHS

Best Arabidopsis Sequence Match ( AT5G67460.1 )
(BLAST)

001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.