Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 8
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059279 | Potato | cytosol | 42.03 | 73.11 |
| GSMUA_Achr7P07950_001 | Banana | extracellular | 41.55 | 64.66 |
| KRH59215 | Soybean | extracellular | 55.07 | 62.98 |
| Solyc04g058080.2.1 | Tomato | extracellular | 53.62 | 62.36 |
| CDY56715 | Canola | cytosol | 32.37 | 59.29 |
| Bra034233.1-P | Field mustard | cytosol | 31.4 | 59.09 |
| GSMUA_Achr5P24740_001 | Banana | endoplasmic reticulum, extracellular | 40.1 | 58.04 |
| CDY21992 | Canola | cytosol | 39.61 | 57.75 |
| CDY48582 | Canola | cytosol | 39.61 | 57.75 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 44.44 | 53.18 |
| TraesCS2A01G252300.1 | Wheat | extracellular | 43.48 | 52.02 |
| TraesCS2B01G272100.1 | Wheat | extracellular | 43.48 | 52.02 |
| AT4G05430.3 | Thale cress | extracellular, plasma membrane | 40.58 | 50.0 |
| OQU88437 | Sorghum | extracellular | 42.51 | 50.0 |
| Zm00001d007864_P001 | Maize | extracellular | 42.51 | 49.72 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 20.29 | 35.9 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 26.09 | 31.03 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 25.6 | 27.18 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 28.5 | 26.82 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 24.15 | 25.91 |
| VIT_12s0028g00050.t01 | Wine grape | extracellular | 29.47 | 25.42 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 23.67 | 23.67 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 25.6 | 20.95 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 27.05 | 15.22 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 24.64 | 12.35 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 30.43 | 10.24 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 11.11 | 6.23 |
Protein Annotations
| MapMan:35.1 | ProteinID:CCB55834 | ProteinID:CCB55834.1 | UniProt:F6HLV9 | EMBL:FN595992 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 | TMHMM:TMhelix | UniParc:UPI0002109906 |
| ArrayExpress:VIT_10s0003g04340 | EnsemblPlantsGene:VIT_10s0003g04340 | EnsemblPlants:VIT_10s0003g04340.t01 | InterPro:X8 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:7433380..7435535
Molecular Weight (calculated)
21975.1 Da
IEP (calculated)
4.319
GRAVY (calculated)
0.233
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFPEPSFAG MLSGYVFSLF LSVSSCIFVL SSSSFWFLGI ELVSLKSNGL QVSTMEGVVQ EKAEAALPIT TLSPPEGNTT FLDGTNWCVA LPGVSQVDLQ
101: NALDWACGLG MADCGAIQAG GACFEPDTLV SHASYAFNSY YQQNGNSDIA CNFGGTATLS KKDPSYGKCS YSTSGSLNSS KSPLSKYKPS FTWWALGAIL
201: LLLCLRI
101: NALDWACGLG MADCGAIQAG GACFEPDTLV SHASYAFNSY YQQNGNSDIA CNFGGTATLS KKDPSYGKCS YSTSGSLNSS KSPLSKYKPS FTWWALGAIL
201: LLLCLRI
001: MRTQFWIFLL FLLLLNFFSQ AARPVMTIRP ESLVGPQGNT TFLEGTTWCV ARPGATQAEL QRALDWACGI GRVDCSVIER HGDCYEPDTI VSHASFAFNA
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
101: YYQTNGNNRI ACYFGGTATF TKINPSYGKC SYDASKSEVS TARSLSEYKA RWLLLMYIGV FSLISRRD
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:TAIR;Acc:AT4G05430]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.