Factsheet for VIT_09s0002g06500.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0129g00230.t01	Wine grape	vacuole	62.6	55.93
PGSC0003DMT400038538	Potato	plasma membrane, vacuole	33.06	30.89
GSMUA_Achr10P...	Banana	mitochondrion, plasma membrane, vacuole	27.1	28.25
Bra031835.1-P	Field mustard	vacuole	27.91	27.18
CDY43577	Canola	vacuole	27.91	26.96
CDY37850	Canola	vacuole	27.37	26.58
AT5G67460.1	Thale cress	vacuole	27.37	26.58
Os10t0347000-01	Rice	endoplasmic reticulum, extracellular, vacuole	19.78	21.22
VIT_12s0057g00700.t01	Wine grape	extracellular	4.34	13.68
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	8.94	13.04
VIT_12s0028g00050.t01	Wine grape	extracellular	7.86	12.08
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	11.38	11.41
VIT_10s0003g02720.t01	Wine grape	plastid	5.96	11.28
VIT_10s0003g04340.t01	Wine grape	plasma membrane	6.23	11.11
VIT_12s0028g02540.t01	Wine grape	extracellular	5.15	10.92
VIT_17s0000g07260.t01	Wine grape	extracellular	5.15	9.18
VIT_05s0029g00190.t01	Wine grape	extracellular	5.42	9.09
VIT_01s0011g00570.t01	Wine grape	extracellular	4.07	7.77
VIT_14s0060g00440.t01	Wine grape	vacuole	12.47	7.48

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100853214	wikigene:100853214	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB59586
ProteinID:CCB59586.1	UniProt:F6HXB6	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100853214	wikigene:LOC100853214	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF98	SUPFAM:SSF51445	UniParc:UPI0002109FC9	ArrayExpress:VIT_09s0002g06500	EnsemblPlantsGene:VIT_09s0002g06500	EnsemblPlants:VIT_09s0002g06500.t01
RefSeq:XP_003632808	RefSeq:XP_003632808.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:+:6440735..6442569

Molecular Weight (calculated)

41387.4 Da

IEP (calculated)

8.609

GRAVY (calculated)

-0.246

Length

369 amino acids

Sequence
(BLAST)

001: MLASSSESAE LLTLYDSSPV VLQAMSHTGV PIAVSVSEDD LNEVPGSVLM VESWIRNHVL AHHPSTNITI IVVGNTVLCN KDQEDKLRLV LPSLRNVYYS
101: LTRWDLEKDI KVSAAFSSNC LNPDSVLDRD DLADKVIKPL LSFLELTNST YSINPPTNFS PLSDESAGLV SSHSESMKKL RTSKLRVNVI VQSAKEGKPQ
201: SRKPSFMHSK FVEPYPTSSS SKSHAQGHPH ILSPTYPSPR PDLHFFFLPI LLTFTLIFLS LHHVPSQTRF LHSSNPLPSS ILTHAWHHRS SHSPNLQPST
301: HHATSCHHPL RLCGCLHQPP WQQRLLDAVT ALLFIVPPWL PSSSCRRWWK APFEVDARVE RQTEKRRAV

Best Arabidopsis Sequence Match ( AT5G67460.1 )
(BLAST)

001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.