Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 37.5 | 60.4 |
| PGSC0003DMT400044716 | Potato | extracellular | 58.33 | 57.38 |
| Solyc07g056310.2.1 | Tomato | extracellular | 57.5 | 55.87 |
| KRH73630 | Soybean | extracellular | 58.75 | 54.65 |
| KRH14480 | Soybean | extracellular | 58.33 | 54.47 |
| KRG98922 | Soybean | extracellular | 56.25 | 52.73 |
| KRH46050 | Soybean | extracellular | 56.25 | 52.73 |
| VIT_10s0003g02720.t01 | Wine grape | plastid | 37.5 | 46.15 |
| VIT_12s0057g00700.t01 | Wine grape | extracellular | 20.42 | 41.88 |
| GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 41.25 | 41.6 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 37.5 | 41.47 |
| Zm00001d009686_P002 | Maize | extracellular | 41.25 | 40.41 |
| EES20007 | Sorghum | extracellular, vacuole | 41.25 | 40.08 |
| HORVU1Hr1G091830.4 | Barley | extracellular | 42.5 | 38.64 |
| Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 40.0 | 37.07 |
| TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 40.83 | 36.84 |
| TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 40.83 | 36.43 |
| Os01t0631500-01 | Rice | extracellular | 42.08 | 36.2 |
| Os05t0581900-01 | Rice | extracellular | 41.25 | 35.23 |
| VIT_12s0028g02540.t01 | Wine grape | extracellular | 22.92 | 31.61 |
| VIT_01s0011g00570.t01 | Wine grape | extracellular | 25.0 | 31.09 |
| Zm00001d011431_P001 | Maize | plasma membrane | 39.17 | 30.42 |
| EES01128 | Sorghum | extracellular | 38.33 | 29.68 |
| VIT_10s0003g04340.t01 | Wine grape | plasma membrane | 25.42 | 29.47 |
| VIT_17s0000g07260.t01 | Wine grape | extracellular | 24.17 | 28.02 |
| TraesCS3A01G227300.1 | Wheat | extracellular | 38.75 | 27.93 |
| VIT_05s0029g00190.t01 | Wine grape | extracellular | 25.42 | 27.73 |
| TraesCS3B01G257100.1 | Wheat | extracellular | 38.33 | 26.98 |
| HORVU3Hr1G056800.1 | Barley | extracellular | 37.92 | 25.63 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 24.17 | 22.92 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 25.0 | 16.3 |
| VIT_07s0129g00230.t01 | Wine grape | vacuole | 25.0 | 14.53 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 35.42 | 13.82 |
| VIT_09s0002g06500.t01 | Wine grape | cytosol, peroxisome, plastid | 12.08 | 7.86 |
Protein Annotations
| EntrezGene:100262530 | wikigene:100262530 | MapMan:35.1 | ProteinID:CCB47475 | ProteinID:CCB47475.1 | UniProt:F6H5C8 |
| EMBL:FN595235 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | EntrezGene:LOC100262530 | wikigene:LOC100262530 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 |
| SMART:SM00768 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00019843E7 | ArrayExpress:VIT_12s0028g00050 | EnsemblPlantsGene:VIT_12s0028g00050 |
| EnsemblPlants:VIT_12s0028g00050.t01 | unigene:Vvi.6519 | InterPro:X8 | RefSeq:XP_002283721 | RefSeq:XP_002283721.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:-:723853..726025
Molecular Weight (calculated)
24932.9 Da
IEP (calculated)
6.721
GRAVY (calculated)
-0.206
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRVVHYFL FLLLGLLICS GSTERGEMGQ KKEGYGTEKQ LHSSSSISIT QKDITTPITT VPTVNPTTPS STTPPVNPDS TPASNPATTT TPTSSGASWC
101: VASQTSSQTA LQVALDYACG YGGADCSAIQ PAGSCYNPNT LRDHASFAFN DYYQKNPVPT SCNFGGTAVV TSTDPSSGTC QYPSTSTSSS VLNTTNSNGA
201: TVFGSQPSSP SSSAVAIPGS LQQFLALACI KVLLLPRDQY
101: VASQTSSQTA LQVALDYACG YGGADCSAIQ PAGSCYNPNT LRDHASFAFN DYYQKNPVPT SCNFGGTAVV TSTDPSSGTC QYPSTSTSSS VLNTTNSNGA
201: TVFGSQPSSP SSSAVAIPGS LQQFLALACI KVLLLPRDQY
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.