Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G420600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 98.16 | 79.18 |
HORVU1Hr1G091830.4 | Barley | extracellular | 96.31 | 79.17 |
TraesCS1B01G451800.1 | Wheat | endoplasmic reticulum, plasma membrane | 94.93 | 77.44 |
EES20007 | Sorghum | extracellular, vacuole | 69.59 | 61.13 |
Zm00001d009686_P002 | Maize | extracellular | 67.74 | 60.0 |
Zm00001d039139_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 63.59 | 53.28 |
Os05t0581900-01 | Rice | extracellular | 67.74 | 52.31 |
GSMUA_Achr3P31190_001 | Banana | cytosol, nucleus, plastid | 34.1 | 49.66 |
PGSC0003DMT400044716 | Potato | extracellular | 42.86 | 38.11 |
Solyc07g056310.2.1 | Tomato | extracellular | 43.32 | 38.06 |
VIT_12s0028g00050.t01 | Wine grape | extracellular | 41.47 | 37.5 |
VIT_10s0003g02720.t01 | Wine grape | plastid | 32.26 | 35.9 |
KRG98922 | Soybean | extracellular | 41.94 | 35.55 |
KRH46050 | Soybean | extracellular | 41.01 | 34.77 |
KRH14480 | Soybean | extracellular | 40.09 | 33.85 |
KRH73630 | Soybean | extracellular | 40.09 | 33.72 |
TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 20.74 | 32.37 |
KRH59086 | Soybean | cytosol, mitochondrion, nucleus | 35.94 | 31.58 |
GSMUA_Achr4P14960_001 | Banana | endoplasmic reticulum, extracellular | 34.56 | 31.51 |
TraesCS5D01G403000.1 | Wheat | extracellular | 23.5 | 30.72 |
TraesCS3D01G299600.1 | Wheat | extracellular | 27.65 | 30.61 |
AT2G30933.1 | Thale cress | extracellular | 31.34 | 29.96 |
KRH59084 | Soybean | extracellular | 34.56 | 29.88 |
KRH42964 | Soybean | extracellular | 37.79 | 29.71 |
CDY29629 | Canola | extracellular | 31.34 | 29.69 |
CDX97778 | Canola | extracellular | 31.34 | 29.69 |
TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 24.42 | 29.12 |
TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.35 | 28.95 |
TraesCS2D01G253000.1 | Wheat | extracellular | 23.04 | 28.9 |
Bra010831.1-P | Field mustard | nucleus | 36.87 | 27.78 |
CDY43335 | Canola | extracellular | 36.41 | 26.78 |
Solyc02g071200.2.1 | Tomato | extracellular | 36.87 | 26.4 |
TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 25.81 | 25.81 |
KRH37784 | Soybean | extracellular | 38.25 | 25.46 |
CDX99818 | Canola | extracellular | 34.56 | 25.42 |
KRH12824 | Soybean | extracellular, vacuole | 37.79 | 25.31 |
TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 23.04 | 25.25 |
TraesCS7D01G468800.1 | Wheat | extracellular | 25.81 | 25.23 |
CDX90189 | Canola | extracellular | 35.94 | 24.84 |
CDY48334 | Canola | vacuole | 35.48 | 24.52 |
AT1G29380.1 | Thale cress | extracellular | 35.48 | 24.44 |
TraesCS7D01G332800.1 | Wheat | plasma membrane | 19.82 | 24.16 |
Bra021679.1-P | Field mustard | extracellular, plasma membrane, vacuole | 33.18 | 23.84 |
TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 33.64 | 22.12 |
Bra032314.1-P | Field mustard | plastid | 35.94 | 20.58 |
TraesCS5D01G513400.1 | Wheat | extracellular | 31.8 | 16.95 |
TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 25.35 | 15.45 |
TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 24.88 | 12.39 |
Protein Annotations
EnsemblPlants:TraesCS1D01G428500.1 | EnsemblPlantsGene:TraesCS1D01G428500 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
SEG:seg | SMART:SM00768 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:480608836..480610283
Molecular Weight (calculated)
21579.1 Da
IEP (calculated)
4.213
GRAVY (calculated)
-0.032
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MPELDVTTPL ATVPLVNPTP MPEATAAPSL AHPTAAAGAG SWCVASPSAG AAALQVALDY ACGQGADCSP IQPGGSCADP DTVRDHASYA FNSYYQKNPV
101: QTSCDFAGAA ILTSTDPSTT SCKYPSTSTG ASVLNTTSPV TPVNPTYGSP PGGSYNSPPG PGGYYNSPPL YGSMSPPDYG GSISAATAMM PGSKSTTAAT
201: SLTCLLVVAT VSLNLCK
101: QTSCDFAGAA ILTSTDPSTT SCKYPSTSTG ASVLNTTSPV TPVNPTYGSP PGGSYNSPPG PGGYYNSPPL YGSMSPPDYG GSISAATAMM PGSKSTTAAT
201: SLTCLLVVAT VSLNLCK
001: MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
101: ACGIGGADCS EIQEGGNCYN PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE DGLGLFGRIP SHPTPKPEAS
201: TSSSRTLISF LYFLCFCVLY PLVITLT
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1G3P4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.