Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G513000.1 | Wheat | extracellular, vacuole | 91.65 | 91.42 |
| TraesCS4A01G358500.1 | Wheat | extracellular | 89.68 | 89.02 |
| HORVU5Hr1G117440.1 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 86.24 | 84.58 |
| Zm00001d034729_P002 | Maize | endoplasmic reticulum, vacuole | 54.05 | 44.81 |
| Os03t0833600-01 | Rice | plasma membrane | 61.18 | 43.38 |
| TraesCS4D01G132800.1 | Wheat | extracellular, plasma membrane, vacuole | 34.4 | 42.42 |
| EER90586 | Sorghum | extracellular | 57.0 | 37.72 |
| Zm00001d012917_P001 | Maize | plasma membrane | 55.28 | 36.7 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 25.06 | 33.22 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 29.48 | 33.15 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 14.0 | 32.95 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 11.06 | 32.37 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 23.83 | 32.23 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 23.34 | 32.2 |
| CDX94970 | Canola | plastid | 23.34 | 32.09 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 28.75 | 31.88 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 16.95 | 31.8 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 24.82 | 30.61 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 13.27 | 30.34 |
| CDY31085 | Canola | plastid | 25.31 | 29.34 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 13.02 | 29.12 |
| TraesCS5D01G403000.1 | Wheat | extracellular | 11.79 | 28.92 |
| CDY32184 | Canola | vacuole | 24.82 | 28.61 |
| TraesCS3D01G299600.1 | Wheat | extracellular | 13.51 | 28.06 |
| TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.53 | 26.84 |
| TraesCS7D01G468800.1 | Wheat | extracellular | 14.5 | 26.58 |
| TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.78 | 26.26 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 37.1 | 24.55 |
| TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 12.04 | 22.58 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 28.26 | 21.82 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 25.06 | 21.75 |
| KRG96680 | Soybean | extracellular | 27.76 | 21.36 |
| KRG90471 | Soybean | vacuole | 31.45 | 21.05 |
| KRH33760 | Soybean | vacuole | 30.96 | 20.62 |
| KRH68400 | Soybean | extracellular | 26.54 | 20.07 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 17.2 | 19.66 |
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 17.69 | 16.51 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G513400.1 | EnsemblPlantsGene:TraesCS5D01G513400 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5D:+:537656444..537657908
Molecular Weight (calculated)
40241.2 Da
IEP (calculated)
5.725
GRAVY (calculated)
-0.001
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPALSLVL CMLLLSHGSA QARKTVPGVT VAAGAEDGSL GRESFMGRVV DVSSNSRRRR ELLGGARETT ARDVFAPVTN PVTVPATNPA SPGGIVTVPA
101: TNPGTGTGFP TNPNLPPLYP EPSATPDPTT MPAPFTNPVA APTMPAPFTA PVTNPATTPT PVPGTSPITN PATMYPGGGA GGGVAVGSAP TTPVYQAPAT
201: TVPTPTTVQP AAGAGTGQST WCVAKAGVTE AALQDGLDFA CGMGGADCSA LQPMGSCYNP NTIQAHASYA FNAYYQRSPS PASCDFGGAG MLVATNPSSG
301: TCMFQTSSGS GSAAGYNPAV TGTTGPVGVT PSFGPVGTTT GTGPAVSSGG SGSTVLNANN YPGGTSMYGP GNPAGFSDTS SGAASLNCSW VMSLIWMFTF
401: AYVKVKV
101: TNPGTGTGFP TNPNLPPLYP EPSATPDPTT MPAPFTNPVA APTMPAPFTA PVTNPATTPT PVPGTSPITN PATMYPGGGA GGGVAVGSAP TTPVYQAPAT
201: TVPTPTTVQP AAGAGTGQST WCVAKAGVTE AALQDGLDFA CGMGGADCSA LQPMGSCYNP NTIQAHASYA FNAYYQRSPS PASCDFGGAG MLVATNPSSG
301: TCMFQTSSGS GSAAGYNPAV TGTTGPVGVT PSFGPVGTTT GTGPAVSSGG SGSTVLNANN YPGGTSMYGP GNPAGFSDTS SGAASLNCSW VMSLIWMFTF
401: AYVKVKV
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.