Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G138000.1 | Wheat | extracellular, plasma membrane, vacuole | 97.58 | 97.58 |
| TraesCS4A01G178000.1 | Wheat | extracellular, plasma membrane, vacuole | 96.67 | 96.67 |
| Zm00001d004933_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 60.3 | 58.36 |
| KXG27714 | Sorghum | vacuole | 60.3 | 57.68 |
| CDY64750 | Canola | endoplasmic reticulum, vacuole | 32.42 | 35.55 |
| TraesCS5D01G400600.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 14.85 | 35.25 |
| Bra020023.1-P | Field mustard | endoplasmic reticulum, vacuole | 31.21 | 34.92 |
| CDX94970 | Canola | plastid | 31.21 | 34.8 |
| TraesCS5D01G513400.1 | Wheat | extracellular | 42.42 | 34.4 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 37.27 | 33.98 |
| TraesCS1D01G428500.1 | Wheat | cytosol, mitochondrion, peroxisome | 22.12 | 33.64 |
| Bra030780.1-P | Field mustard | endoplasmic reticulum, extracellular | 31.21 | 33.55 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 37.27 | 33.52 |
| AT1G09460.1 | Thale cress | extracellular, vacuole | 33.03 | 33.03 |
| TraesCS2D01G253000.1 | Wheat | extracellular | 17.27 | 32.95 |
| TraesCS3D01G299600.1 | Wheat | extracellular | 18.18 | 30.61 |
| CDY32184 | Canola | vacuole | 32.12 | 30.03 |
| CDY31085 | Canola | plastid | 31.82 | 29.91 |
| TraesCS7D01G468800.1 | Wheat | extracellular | 20.0 | 29.73 |
| TraesCS5D01G467200.1 | Wheat | extracellular, plasma membrane | 16.36 | 29.67 |
| TraesCS7D01G332800.1 | Wheat | plasma membrane | 15.15 | 28.09 |
| TraesCS5D01G403000.1 | Wheat | extracellular | 13.33 | 26.51 |
| TraesCS6D01G099100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 14.85 | 25.79 |
| TraesCS2D01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 15.45 | 25.76 |
| TraesCS1D01G335200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 16.36 | 24.88 |
| VIT_14s0060g00440.t01 | Wine grape | vacuole | 45.15 | 24.23 |
| KRG90471 | Soybean | vacuole | 41.82 | 22.7 |
| KRH33760 | Soybean | vacuole | 41.82 | 22.59 |
| KRH68400 | Soybean | extracellular | 34.85 | 21.38 |
| GSMUA_Achr2P02010_001 | Banana | cytosol | 30.3 | 21.32 |
| KRG96680 | Soybean | extracellular | 33.94 | 21.17 |
| GSMUA_Achr11P... | Banana | extracellular, plastid, vacuole | 32.73 | 20.49 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 21.52 | 19.94 |
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 21.21 | 16.05 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G132800.1 | EnsemblPlantsGene:TraesCS4D01G132800 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF118 | PFAM:PF07983 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00768 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:119416528..119419854
Molecular Weight (calculated)
33275.8 Da
IEP (calculated)
4.054
GRAVY (calculated)
0.024
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVRLLFLLL LPVCSFLFLE LPSVSGKPTV HDDLDPAQVT NPTTPITVPS TNPAPTIITV PSTNPTITIP SLNPLPTPIT TPSNDPSTTL PLPTPSTSAP
101: NTPVTIPVTT PSTFPPSAPL TNPAANPMVP TVGTTPPTAP TTTPVTAPVV SGQQAWCVAK AGSSETALQE ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAMLANA NPSSGTCVLA SSMSSPTSST AGSTAPTTSS TSPVTSSSGS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
101: NTPVTIPVTT PSTFPPSAPL TNPAANPMVP TVGTTPPTAP TTTPVTAPVV SGQQAWCVAK AGSSETALQE ALDYACGIGG ADCSPIQPSG SCYYPNTLEA
201: HASYAFNSYY QKNPAPSSCD FRGAAMLANA NPSSGTCVLA SSMSSPTSST AGSTAPTTSS TSPVTSSSGS DPGSSVLNSS GSGISGSSDF GSDFPGEANT
301: GNGWHSILPS GWSWAGLFST LALPYVGGIF
001: MAKQSYFFVF TFLFLSLLSY CSSTTTHHDV LNPPTVFPTN PTTTPTATFP PVTITPTNPA TTVPIVPPVT TIPPPTLTPP PVITIPPPTL TPPVTNPVTN
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
101: PVTQYPPTQP SGTVPVPVPV VAPPVVSNSP SVSGQSWCVA KPGASQVSLQ QALDYACGIA DCSQLQQGGN CYSPISLQSH ASFAFNSYYQ KNPSPQSCDF
201: GGAASLVNTN PSTGSCIYQT GSSTSTPMTA GTTTPTPSTQ TVNQPPVTST PIIPTGGGII GVGTPPAIFN PANPTSNTLN NPSSGGLAGG YGFDGSPNEN
301: NPTSSDSTHL KIHFGHAMVA TLILHAVLFH
Arabidopsis Description
Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I0Z2]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.