Factsheet for TraesCS5D01G400600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular, nucleus

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G395600.1	Wheat	cytosol, extracellular, mitochondrion, plastid	94.96	96.35
TraesCS5A01G390800.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	93.53	93.53
HORVU5Hr1G095450.3	Barley	extracellular	83.45	87.22
GSMUA_Achr9P09230_001	Banana	extracellular	56.83	65.29
GSMUA_Achr11P...	Banana	extracellular	53.24	62.18
CDY47296	Canola	extracellular	49.64	57.98
VIT_12s0057g00700.t01	Wine grape	extracellular	47.48	56.41
AT5G35740.1	Thale cress	extracellular	48.2	56.3
PGSC0003DMT400015724	Potato	extracellular	46.04	56.14
Bra035382.1-P	Field mustard	extracellular	47.48	55.46
CDX74636	Canola	extracellular	47.48	55.46
KRH51177	Soybean	extracellular	46.04	55.17
Solyc07g047710.2.1	Tomato	extracellular	44.6	54.39
KRH14105	Soybean	extracellular	43.88	51.69
Solyc11g012580.1.1	Tomato	extracellular	43.17	51.28
PGSC0003DMT400034582	Potato	extracellular	42.45	50.86
KRH74013	Soybean	extracellular	42.45	50.0
CDY05067	Canola	endoplasmic reticulum, extracellular	35.25	39.52
AT2G04910.1	Thale cress	extracellular	35.25	39.52
CDX90730	Canola	endoplasmic reticulum, extracellular	33.09	36.8
CDY72034	Canola	endoplasmic reticulum, extracellular	30.94	35.54
TraesCS2D01G253000.1	Wheat	extracellular	33.09	26.59
TraesCS5D01G467200.1	Wheat	extracellular, plasma membrane	32.37	24.73
TraesCS7D01G332800.1	Wheat	plasma membrane	30.22	23.6
TraesCS5D01G403000.1	Wheat	extracellular	28.06	23.49
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	28.78	21.05
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	32.37	20.74
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	27.34	19.19
TraesCS7D01G468800.1	Wheat	extracellular	29.5	18.47
TraesCS3D01G299600.1	Wheat	extracellular	25.18	17.86
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	27.34	17.51
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	35.25	14.85
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	33.81	13.2
TraesCS5D01G513400.1	Wheat	extracellular	32.37	11.06
TraesCS5D01G374100.1	Wheat	extracellular, vacuole	28.78	9.17

Protein Annotations

EnsemblPlants:TraesCS5D01G400600.1	EnsemblPlantsGene:TraesCS5D01G400600	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
SMART:SM00768	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:-:465712231..465713830

Molecular Weight (calculated)

15829.9 Da

IEP (calculated)

8.272

GRAVY (calculated)

-0.325

Length

139 amino acids

Sequence
(BLAST)

001: MHTYLPPSAA RVKNCYLKKQ AVTRLILLLY FILHFATVSA QQEDRNWEKQ WCIADEQTPD DILQIALSWA CGPGGADCTM IEPNKSCYLP NTVRDHASYA
101: FNSYWQKYKK HGGSCYFNAA AMVTNLNPSR KSCNFEVVP

Best Arabidopsis Sequence Match ( AT5G35740.1 )
(BLAST)

001: MSTFLIRILL PLLIIAMTLP RRSEAESEQW CIADEQTPDD ELQAALDWAC GKGGADCSKM QQENQPCFLP NTIRDHASFA FNSYYQTYKN KGGSCYFKGA
101: AMITELDPSH GSCQYEYNP

Arabidopsis Description

At5g35740 [Source:UniProtKB/TrEMBL;Acc:Q9FKH4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.