Factsheet for TraesCS5D01G374100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G366600.1	Wheat	plastid	87.39	89.86
TraesCS5A01G365000.1	Wheat	extracellular	94.72	89.2
HORVU5Hr1G089770.2	Barley	plastid	38.07	86.01
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	24.31	51.46
KRH43685	Soybean	plastid	26.38	46.37
Os09t0560850-00	Rice	cytosol, endoplasmic reticulum, peroxisome	61.01	45.78
KXG36188	Sorghum	cytosol, endoplasmic reticulum, vacuole	56.42	45.39
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	54.59	41.54
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	23.17	39.92
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	33.26	39.4
PGSC0003DMT400025000	Potato	nucleus	25.0	39.21
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	26.38	38.98
TraesCS7D01G468800.1	Wheat	extracellular	19.5	38.29
Solyc05g016390.2.1	Tomato	endoplasmic reticulum, extracellular	21.56	36.43
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	26.15	36.42
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	26.83	36.22
KRG90034	Soybean	extracellular, plasma membrane	23.85	35.14
KRH13771	Soybean	vacuole	28.67	34.82
AT1G79480.1	Thale cress	extracellular	30.5	33.5
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	28.67	32.47
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	28.9	32.39
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	25.92	31.74
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	28.21	31.46
TraesCS5D01G400600.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, nucleus	9.17	28.78
TraesCS5D01G403000.1	Wheat	extracellular	9.86	25.9
TraesCS2D01G253000.1	Wheat	extracellular	10.09	25.43
TraesCS1D01G428500.1	Wheat	cytosol, mitochondrion, peroxisome	12.39	24.88
TraesCS7D01G332800.1	Wheat	plasma membrane	9.63	23.6
TraesCS5D01G467200.1	Wheat	extracellular, plasma membrane	9.63	23.08
TraesCS6D01G099100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	9.63	22.11
TraesCS4D01G132800.1	Wheat	extracellular, plasma membrane, vacuole	16.05	21.21
TraesCS3D01G299600.1	Wheat	extracellular	9.4	20.92
TraesCS2D01G185800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	8.94	19.7
TraesCS1D01G335200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	8.94	17.97
TraesCS5D01G513400.1	Wheat	extracellular	16.51	17.69

Protein Annotations

EnsemblPlants:TraesCS5D01G374100.1	EnsemblPlantsGene:TraesCS5D01G374100	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF98	PFAM:PF07983
PRINTS:PR01217	SEG:seg	SignalP:SignalP-TM	SMART:SM00768	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:447239799..447241562

Molecular Weight (calculated)

44592.4 Da

IEP (calculated)

3.783

GRAVY (calculated)

-0.263

Length

436 amino acids

Sequence
(BLAST)

001: MGECKSSRRP SRPLLLSAIV IVLAFFVAQC AGARVLTVDE LLDQYSESDH HSASPPPGSP GCAPEPEASP PPVIPAPSFA YLSPPPPMQF YSPPPPEVTP
101: SPPEVTPSPP EVAPSPPEIA PLPPVVAPSP PEIAPLPPVV APSPPEIAPM PPVVAPSPPE IAPLPPVVAP SPPDIEPFPS PPEVTPLPPI VYPSPPEVAP
201: SPPEVAPFPG PPEVTPSPPE VAPFPGPPEV TPSPPDVTPF PGPPEVEPSP PEVEPSPGPP EVTPSPPEVT PFPGTPYVAP SPPEVTPFPS PPEVTPSPPD
301: YAPYPPPESS PGSGSGSGSS PSPPGGSFQP PVVLPPTTGP PSPSAGHAEW CVAKPSVPAA IVQQAMDYAC ASGADCESLQ ADGACFKPDT MTSHASYAFN
401: SYWQRAKSTG ATCDFGGTAM LITKDPSYDN CHYSVM

Best Arabidopsis Sequence Match ( AT1G79480.1 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG
101: NAPPFCINPP NTPPSSSYPG LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS NPNPPDSSSN PNSNPNPPES
201: SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP
301: SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.