Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g047710.2.1 | Tomato | extracellular | 18.99 | 42.98 |
| Zm00001d042912_P001 | Maize | nucleus | 28.68 | 41.57 |
| Solyc11g012580.1.1 | Tomato | extracellular | 17.05 | 37.61 |
| VIT_03s0017g02240.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 36.82 | 37.55 |
| HORVU5Hr1G089770.2 | Barley | plastid | 27.91 | 37.31 |
| KRG90034 | Soybean | extracellular, plasma membrane | 41.86 | 36.49 |
| HORVU2Hr1G099430.1 | Barley | plastid | 31.01 | 34.78 |
| EER90180 | Sorghum | extracellular, plasma membrane | 28.68 | 33.18 |
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 37.21 | 32.54 |
| TraesCS7D01G468800.1 | Wheat | extracellular | 27.91 | 32.43 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 27.91 | 32.29 |
| GSMUA_Achr6P00220_001 | Banana | nucleus | 37.6 | 32.01 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 27.52 | 31.98 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 27.13 | 31.96 |
| Os06t0665200-00 | Rice | cytosol | 25.97 | 31.31 |
| Solyc04g058080.2.1 | Tomato | extracellular | 18.22 | 26.4 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 32.56 | 25.61 |
| TraesCS2A01G425000.1 | Wheat | plastid | 35.27 | 25.21 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 34.5 | 25.0 |
| Solyc01g010310.2.1 | Tomato | extracellular | 18.22 | 24.87 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 34.11 | 24.65 |
| Solyc07g056310.2.1 | Tomato | extracellular | 23.26 | 24.29 |
| Solyc05g012380.2.1 | Tomato | extracellular | 18.99 | 24.26 |
| Solyc09g091920.2.1 | Tomato | endoplasmic reticulum, extracellular | 17.83 | 23.35 |
| Solyc03g115200.2.1 | Tomato | extracellular | 16.28 | 22.46 |
| KXG27096 | Sorghum | extracellular, vacuole | 36.82 | 22.3 |
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 36.43 | 21.56 |
| Solyc02g071200.2.1 | Tomato | extracellular | 24.81 | 21.12 |
| TraesCS5B01G366600.1 | Wheat | plastid | 34.5 | 20.99 |
| Solyc12g098410.1.1 | Tomato | endoplasmic reticulum, extracellular | 15.89 | 20.71 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 36.43 | 20.3 |
| Solyc01g101120.2.1 | Tomato | endoplasmic reticulum, golgi | 26.36 | 18.53 |
| Solyc07g053430.2.1 | Tomato | endoplasmic reticulum, extracellular | 15.89 | 18.22 |
| KXG36188 | Sorghum | cytosol, endoplasmic reticulum, vacuole | 36.82 | 17.53 |
| Os09t0560850-00 | Rice | cytosol, endoplasmic reticulum, peroxisome | 39.15 | 17.38 |
| Zm00001d026281_P003 | Maize | plastid | 35.66 | 16.79 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 36.43 | 16.4 |
| Solyc04g005420.2.1 | Tomato | extracellular, vacuole | 15.89 | 13.36 |
Protein Annotations
| MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 |
| GO:GO:0046658 | UniProt:K4BZ02 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF98 | SMART:SM00768 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc05g016390.2 | EnsemblPlants:Solyc05g016390.2.1 | UniParc:UPI0002766E4F | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr5:-:16038482..16039802
Molecular Weight (calculated)
27250.3 Da
IEP (calculated)
8.551
GRAVY (calculated)
-0.300
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTSSIMKF YILALSTYQV LVASSPFGLS DRARITPSLG RYQRLRLLQV ESTSPESSFP YGTYTSPPLL SGVVPPVNPQ INSPPLGISS PPAPLKSVPP
101: SPQNSSPYGT ITPPLTPAAM PTPLLPTLPP PSPTAQTPQH NAPKPPAVNQ PPPNSSHSST PPPSKKPENA IWCVAKPTVP ADLIQQALDY ACGSGAGCDA
201: IQPNGACYQP TTLLSHASYA FNSYWQKKKQ GGGTCDFGGT AMLVTVDPSY NQCLFTYN
101: SPQNSSPYGT ITPPLTPAAM PTPLLPTLPP PSPTAQTPQH NAPKPPAVNQ PPPNSSHSST PPPSKKPENA IWCVAKPTVP ADLIQQALDY ACGSGAGCDA
201: IQPNGACYQP TTLLSHASYA FNSYWQKKKQ GGGTCDFGGT AMLVTVDPSY NQCLFTYN
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SYQHCRFVLS
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.