Factsheet for Zm00001d026281_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 3
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042912_P001	Maize	nucleus	28.83	88.76
Zm00001d002348_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	46.72	78.05
HORVU2Hr1G099430.1	Barley	plastid	25.36	60.43
TraesCS2B01G444800.1	Wheat	extracellular, plasma membrane	33.39	51.26
TraesCS2D01G423000.1	Wheat	extracellular, plasma membrane	32.48	50.0
TraesCS2A01G425000.1	Wheat	plastid	32.85	49.86
GSMUA_Achr8P33530_001	Banana	cytosol, extracellular, plastid, vacuole	16.61	44.17
VIT_03s0017g02240.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	18.98	41.11
KRH43685	Soybean	plastid	18.25	40.32
PGSC0003DMT400025000	Potato	nucleus	19.34	38.13
Solyc12g017360.1.1	Tomato	cytosol, peroxisome, plastid	19.53	36.27
Solyc05g016390.2.1	Tomato	endoplasmic reticulum, extracellular	16.79	35.66
CDY56795	Canola	cytosol, nucleus, plastid, vacuole	19.53	34.19
KRG90034	Soybean	extracellular, plasma membrane	18.25	33.78
KRH13771	Soybean	vacuole	21.72	33.15
Bra008414.1-P	Field mustard	cytosol, nucleus, plastid, vacuole	19.34	32.82
VIT_19s0085g00810.t01	Wine grape	golgi, vacuole	21.53	32.07
Zm00001d007864_P001	Maize	extracellular	9.67	29.94
CDX87377	Canola	endoplasmic reticulum, extracellular, vacuole	20.99	29.87
Zm00001d022059_P001	Maize	endoplasmic reticulum, extracellular	10.77	29.8
CDX88545	Canola	endoplasmic reticulum, extracellular, vacuole	20.99	29.56
Bra035122.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	20.8	29.16
Zm00001d006776_P001	Maize	endoplasmic reticulum, extracellular, vacuole	10.58	29.15
Zm00001d006777_P003	Maize	endoplasmic reticulum, extracellular, vacuole	10.58	29.15
AT1G79480.1	Thale cress	extracellular	20.8	28.72
Zm00001d016545_P001	Maize	extracellular	9.67	28.34
Zm00001d047293_P001	Maize	endoplasmic reticulum, extracellular, vacuole	10.04	28.06
Zm00001d043361_P001	Maize	endoplasmic reticulum, extracellular	9.49	27.66
Zm00001d050544_P001	Maize	extracellular	9.31	27.27
Zm00001d029539_P001	Maize	endoplasmic reticulum, extracellular, vacuole	9.67	26.5
Zm00001d004933_P001	Maize	endoplasmic reticulum, extracellular, vacuole	15.15	24.34
Zm00001d009686_P002	Maize	extracellular	10.77	24.08
Zm00001d039139_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	10.77	22.78
Zm00001d010728_P005	Maize	extracellular	8.94	22.37
Zm00001d046155_P001	Maize	extracellular	7.12	22.16
Zm00001d006343_P001	Maize	endoplasmic reticulum, plastid, vacuole	22.81	21.82
Zm00001d013250_P003	Maize	extracellular	8.58	20.98
Zm00001d011431_P001	Maize	plasma membrane	11.68	20.71
Zm00001d038682_P001	Maize	extracellular	8.39	20.0
Zm00001d034062_P001	Maize	cytosol, golgi, peroxisome	8.21	18.44
Zm00001d034729_P002	Maize	endoplasmic reticulum, vacuole	13.87	15.48
Zm00001d012917_P001	Maize	plasma membrane	14.96	13.38

Protein Annotations

EnsemblPlants:Zm00001d026281_P003	EnsemblPlants:Zm00001d026281_T003	EnsemblPlantsGene:Zm00001d026281	InterPro:X8	PANTHER:PTHR32227	PANTHER:PTHR32227:SF237
PFAM:PF07983	ProteinID:AQK46053.1	SEG:seg	SMART:SM00768	UniParc:UPI0008450BBE	UniProt:A0A1D6JE16
MapMan:35.1	:	:	:	:	:

Description

Carbohydrate-binding X8 domain superfamily protein

Coordinates

chr10:-:142749949..142756081

Molecular Weight (calculated)

54651.9 Da

IEP (calculated)

4.515

GRAVY (calculated)

-0.312

Length

548 amino acids

Sequence
(BLAST)

001: MACMADPHRC SSSCAPLTSR KLAMHIMARP TASCLLLQCT AAQGGRQPGA AMAPKDRVPL VSAGLAVASL LLLLLCATRC EARAMAATAR RLSSSSSSPL
101: LNALFKLNFI RTVEPARRIP TAGDEEAASD INSPFCVNPP DAPSATTPPF KPFTPSFPGQ APQLPPITPV PPSFEPSPPA PENGASGGGQ GGGQGQGGDQ
201: GQGGGGDQGQ GGGQSQGGDQ GQGGGGGDQG QGGGQSQGGD QGQGGGQGQG GSQGQGGGGG DQGQEGPPAS TTPNSPPQVG PGGIPFGSVP PSPIVVVPSP
301: PGSGPDPGSG LGGGGSGSDG GPFQPPIIYP PPLAPPLPPG AGQTLWCVAK PTVPDPIIQE AMDYACGAGA GCDSILPSGS CYRPNTVLAH ASFAFNSYWQ
401: QAKATGGTCD FGGTATIVTR DPSYEECKFD LIYLVDSQDV ATGGIDTNAV IFDRSSGQIL CTLTGHSKKN DNVGLVEKDL GNQKVLLSGI NLDEDAKPRG
501: DNCEQWSLFV GTAQASLTLA LASSVQGQGC TDPKAGAVDP KAENKVLD

Best Arabidopsis Sequence Match ( AT1G79480.1 )
(BLAST)

001: MESYRVFTTI CLLLCLFLSA NFFTHYVVDA RKSVGFEREP KKVMMIKALK HTSLLQKMMT QLNLAQPLDY SSSSNTQPYG VSTTLTLPPY VSLPPLSVPG
101: NAPPFCINPP NTPPSSSYPG LSPPPGPITL PNPPDSSSNP NSNPNPPESS SNPNPPDSSS NPNSNPNPPV TVPNPPESSS NPNPPDSSSN PNSNPNPPES
201: SSNPNPPVTV PNPPESSSNP NPPESSSNPN PPITIPYPPE SSSPNPPEIV PSPPESGYTP GPVLGPPYSE PGPSTPTGSI PSPSSGFLPP IVYPPPMAPP
301: SPSVTPTSAY WCVAKPSVPD PIIQEAMNFA CGSGADCHSI QPNGPCFKPN TLWAHASFAY NSYWQRTKST GGSCTFGGTG MLVTVDPSFN GCHFDFF

Arabidopsis Description

Carbohydrate-binding X8 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q5Q0D0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.