Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g017360.1.1 | Tomato | cytosol, peroxisome, plastid | 88.85 | 83.73 |
| KRH43685 | Soybean | plastid | 41.37 | 46.37 |
| Zm00001d042912_P001 | Maize | nucleus | 29.5 | 46.07 |
| GSMUA_Achr6P00220_001 | Banana | nucleus | 47.84 | 43.89 |
| CDY56795 | Canola | cytosol, nucleus, plastid, vacuole | 46.4 | 41.21 |
| Os06t0665200-00 | Rice | cytosol | 31.65 | 41.12 |
| HORVU2Hr1G099430.1 | Barley | plastid | 33.81 | 40.87 |
| Bra008414.1-P | Field mustard | cytosol, nucleus, plastid, vacuole | 47.48 | 40.87 |
| EER90180 | Sorghum | extracellular, plasma membrane | 32.73 | 40.81 |
| HORVU5Hr1G089770.2 | Barley | plastid | 28.06 | 40.41 |
| TraesCS7D01G468800.1 | Wheat | extracellular | 31.3 | 39.19 |
| TraesCS7A01G481700.1 | Wheat | extracellular | 30.58 | 38.81 |
| TraesCS7B01G384100.1 | Wheat | extracellular | 30.58 | 38.29 |
| KRH13771 | Soybean | vacuole | 49.28 | 38.16 |
| HORVU7Hr1G108980.1 | Barley | extracellular | 30.58 | 38.12 |
| PGSC0003DMT400045877 | Potato | extracellular | 14.39 | 37.38 |
| VIT_19s0085g00810.t01 | Wine grape | golgi, vacuole | 49.28 | 37.23 |
| CDX88545 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.72 | 36.25 |
| CDX87377 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.0 | 36.1 |
| PGSC0003DMT400015724 | Potato | extracellular | 14.75 | 35.96 |
| Bra035122.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 50.0 | 35.55 |
| AT1G79480.1 | Thale cress | extracellular | 47.48 | 33.25 |
| PGSC0003DMT400059279 | Potato | cytosol | 14.03 | 32.77 |
| PGSC0003DMT400034582 | Potato | extracellular | 13.31 | 31.9 |
| Zm00001d002348_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 35.61 | 30.18 |
| TraesCS2B01G444800.1 | Wheat | extracellular, plasma membrane | 37.77 | 29.41 |
| TraesCS2D01G423000.1 | Wheat | extracellular, plasma membrane | 37.05 | 28.93 |
| TraesCS2A01G425000.1 | Wheat | plastid | 37.41 | 28.81 |
| TraesCS5D01G374100.1 | Wheat | extracellular, vacuole | 39.21 | 25.0 |
| KXG27096 | Sorghum | extracellular, vacuole | 38.13 | 24.88 |
| TraesCS5B01G366600.1 | Wheat | plastid | 37.41 | 24.53 |
| TraesCS5A01G365000.1 | Wheat | extracellular | 38.85 | 23.33 |
| KXG36188 | Sorghum | cytosol, endoplasmic reticulum, vacuole | 44.96 | 23.06 |
| PGSC0003DMT400003054 | Potato | extracellular | 15.83 | 23.04 |
| PGSC0003DMT400063348 | Potato | extracellular | 15.11 | 22.7 |
| Os09t0560850-00 | Rice | cytosol, endoplasmic reticulum, peroxisome | 46.76 | 22.38 |
| PGSC0003DMT400072939 | Potato | extracellular | 16.55 | 22.33 |
| PGSC0003DMT400080365 | Potato | endoplasmic reticulum, extracellular | 15.83 | 21.57 |
| Zm00001d006343_P001 | Maize | endoplasmic reticulum, plastid, vacuole | 44.24 | 21.47 |
| PGSC0003DMT400011608 | Potato | mitochondrion | 14.39 | 21.28 |
| PGSC0003DMT400044716 | Potato | extracellular | 18.35 | 20.9 |
| PGSC0003DMT400038538 | Potato | plasma membrane, vacuole | 29.5 | 20.76 |
| Zm00001d026281_P003 | Maize | plastid | 38.13 | 19.34 |
| PGSC0003DMT400047134 | Potato | extracellular, golgi, vacuole | 24.46 | 18.78 |
| PGSC0003DMT400024290 | Potato | extracellular, vacuole | 14.39 | 11.56 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025000 | EnsemblPlantsGene:PGSC0003DMG400009657 | InterPro:X8 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF237 | PFAM:PF07983 |
| PGSC:PGSC0003DMG400009657 | PRINTS:PR01217 | SEG:seg | SMART:SM00768 | UniParc:UPI0002966B59 | UniProt:M1AKV9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400009657]
Coordinates
chr12:+:10942236..10944236
Molecular Weight (calculated)
29661.1 Da
IEP (calculated)
4.522
GRAVY (calculated)
-0.209
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSSYGVGS PFNLPPYDSL PPIPNTPTTP YCVNPPPANG NSGPIINQPT SPSYGPIINQ PPSPSYGPII NQPSSPSSGP IIIPSPPPQF LPPIIIPNTP
101: QYVSPNPPTN VPSPTQPIFS PPYYYEPSPP RYVPINPPSY NVPIIPPTGY FLPPVVYPPP AVPPPPHIAD AIALWCVAKP SVPDPIIQEA MNYACASGAD
201: CDQLRPNGSC YQPDTLFAHA SYAFNSYWQR TKMAGGTCDF GGTAILVTVD PSKTLFAFIK INTSESECTS ECNRFLLT
101: QYVSPNPPTN VPSPTQPIFS PPYYYEPSPP RYVPINPPSY NVPIIPPTGY FLPPVVYPPP AVPPPPHIAD AIALWCVAKP SVPDPIIQEA MNYACASGAD
201: CDQLRPNGSC YQPDTLFAHA SYAFNSYWQR TKMAGGTCDF GGTAILVTVD PSKTLFAFIK INTSESECTS ECNRFLLT
001: MRHLLYIFLF IAFLSFAGAG QESTPIEALN LNNNLLQLPQ TTDLDLAVSV SGNKTITEIS SSIIKAETWL KTHILSRYPS TKITTIVIFF PDSCQTTQHS
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SKFHNSDLP
101: SDLVLSSLKN IYHSLTRWGL ENNIKVSSGF SYQCLNNPKS SEMFKPVLIF LKTINSTFTI NPPQNFLTSP HNHRDLLHSV EKLGSLSFNK VNFLNPEPEQ
201: ESTTTMTRRN LRSLVNLSSK FTTSFPTLPS PSPETSPIHS SIGSPSPPTI PYFPEPSQSP MESNQGISLP PCLPYHPAPS PQPVKKKNVE GLWCVAKPSV
301: AAETLQQSLD FACGQGGANC DEIKPHGICY YPDTVMAHAS YAFNSYWQKT KRNGGTCSFG GTAMLITTDP SKFHNSDLP
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FJX7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.